Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 VTRNA3-1P-201ENST00000362552 102 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 RNU1-108P-201ENST00000362556 161 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 RNU6-1138P-201ENST00000365359 106 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 RNU6-616P-201ENST00000384353 107 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AC092047.1-201ENST00000424997 240 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 RPL23AP56-201ENST00000460778 453 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 OR9P1P-201ENST00000496431 281 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AC018645.1-201ENST00000505003 109 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AC138207.8-204ENST00000579588 527 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 FTX_3.1-201ENST00000610451 147 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 AC018628.1-201ENST00000624147 3819 ntBASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 AL033519.1-201ENST00000407266 307 ntBASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 AC011504.1-201ENST00000623331 4103 ntBASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CHIC1Q5VXU3 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 NOL8P1-201ENST00000508336 3529 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 AC123769.2-201ENST00000624332 5984 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 MAPK10-371ENST00000641952 5209 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 RNU4-13P-201ENST00000364019 141 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 SNORA1-201ENST00000384107 130 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 RNY1P6-201ENST00000384193 109 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 RNA5SP201-201ENST00000410316 124 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 RNA5SP155-201ENST00000411154 129 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 OR2AH1P-201ENST00000425717 928 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 RNU2-11P-201ENST00000459191 187 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 AL731556.1-201ENST00000394628 3711 ntBASIC11.06□□□□□ -0.64
CHIC1Q5VXU3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 AL356292.1-201ENST00000283110 373 ntBASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 Y_RNA.486-201ENST00000384398 107 ntBASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 NDUFB4P4-201ENST00000404822 243 ntBASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 AL138899.2-201ENST00000439139 499 ntBASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 CYCSP1-201ENST00000604815 315 ntBASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 AC007546.2-201ENST00000623996 360 ntBASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC11.05□□□□□ -0.64
CHIC1Q5VXU3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 Y_RNA.340-201ENST00000365330 92 ntBASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 AL355796.1-201ENST00000406706 323 ntBASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 CYCSP48-201ENST00000417124 323 ntBASIC11.04□□□□□ -0.64
CHIC1Q5VXU3 FAM183DP-201ENST00000421987 399 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms