Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 RLIMP1-201ENST00000339626 1680 ntBASIC4.48□□□□□ -1.69
ATG4DQ86TL0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4DQ86TL0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 HAUS6P2-201ENST00000433254 2404 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 RNU6-1027P-201ENST00000383998 107 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 Y_RNA.533-201ENST00000384596 114 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 SNORA69.1-201ENST00000390904 137 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 HMGB3P7-201ENST00000400214 611 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AL078599.1-201ENST00000402075 293 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 RN7SKP51-201ENST00000410781 304 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AL030996.1-201ENST00000411430 235 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 OR4C10P-201ENST00000434991 931 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AL589765.3-201ENST00000446084 462 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC000111.2-201ENST00000448200 210 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC239809.1-201ENST00000450470 217 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC005798.1-201ENST00000513715 387 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 ACA59.1-201ENST00000515966 143 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 RNU7-200P-201ENST00000516105 62 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 RNA5SP249-201ENST00000516127 99 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 MTND5P41-201ENST00000517498 206 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC126177.3-201ENST00000551839 688 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 SNHG22-203ENST00000617833 660 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC019206.1-201ENST00000621938 425 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 AC091953.3-201ENST00000623220 236 ntBASIC4.47□□□□□ -1.69
ATG4DQ86TL0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4DQ86TL0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
ATG4DQ86TL0 AL022322.2-201ENST00000624072 20397 ntBASIC4.46□□□□□ -1.69
ATG4DQ86TL0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATG4DQ86TL0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
ATG4DQ86TL0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 RNU4-44P-201ENST00000363050 141 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 RN7SKP103-201ENST00000363848 320 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 RNY1P5-201ENST00000383890 115 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 Y_RNA.458-201ENST00000384240 102 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 SNORD115-46-201ENST00000390982 71 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AL357515.1-201ENST00000402967 542 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 RNU6-735P-201ENST00000410612 107 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 OR2AH1P-201ENST00000425717 928 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AL591704.1-201ENST00000432574 275 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 Z95327.1-201ENST00000446082 482 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 HMGN2P13-201ENST00000476476 274 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC083982.1-201ENST00000485679 344 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AL359273.1-201ENST00000510918 627 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 RAB9BP1-201ENST00000519581 626 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC025884.1-201ENST00000556034 378 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC136932.1-201ENST00000574771 208 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 CYCSP40-201ENST00000575927 294 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AP001485.1-201ENST00000604799 199 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 MIR3976-201ENST00000606807 139 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AL591516.1-201ENST00000611326 274 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AL049539.1-201ENST00000611964 459 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 MIR376A1-201ENST00000616574 68 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AC008758.3-201ENST00000507003 1829 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATG4DQ86TL0 AP001148.1-201ENST00000624124 2359 ntBASIC4.46□□□□□ -1.7
ATG4DQ86TL0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms