Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC022861.1-201ENST00000522981 663 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC007834.2-201ENST00000536310 343 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AL133271.1-201ENST00000538229 291 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGCS2P54868 OSBPL9P5-201ENST00000542581 171 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC090888.1-201ENST00000561335 1141 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC087481.2-201ENST00000565492 330 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC011260.1-201ENST00000578420 472 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC090616.2-202ENST00000584248 222 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AL390208.1-201ENST00000605885 644 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC068831.7-201ENST00000616954 363 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AL031667.3-201ENST00000620124 655 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC068057.2-201ENST00000624047 895 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.98□□□□□ -1.93
HMGCS2P54868 AC110774.1-201ENST00000623567 2018 ntBASIC2.98□□□□□ -1.93
HMGCS2P54868 AC097714.1-201ENST00000511272 1647 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HMGCS2P54868 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
HMGCS2P54868 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.97□□□□□ -1.93
HMGCS2P54868 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HMGCS2P54868 RPL21P132-201ENST00000331267 462 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 RNU6-462P-201ENST00000362659 105 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 RNU1-101P-201ENST00000391171 127 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.97□□□□□ -1.93
HMGCS2P54868 RPS3AP26-201ENST00000398259 784 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGCS2P54868 Z98742.3-201ENST00000418637 326 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 USP9YP20-201ENST00000419224 558 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 RPL21P32-201ENST00000419877 477 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 MTND2P18-201ENST00000419962 1030 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 AL365203.2-201ENST00000423444 196 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 MTCO1P39-201ENST00000426148 480 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGCS2P54868 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGCS2P54868 AC011816.1-201ENST00000441346 546 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 HSPE1P28-201ENST00000443139 211 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 MLLT10P2-201ENST00000506434 249 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 MTND4LP22-201ENST00000508209 276 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 AC093677.1-201ENST00000514414 678 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 RNU6-759P-201ENST00000516740 103 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 RNU6-711P-201ENST00000517255 106 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HMGCS2P54868 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGCS2P54868 AL845331.3-202ENST00000562856 261 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.97□□□□□ -1.93
HMGCS2P54868 AC107294.3-201ENST00000609211 526 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 AC004223.4-201ENST00000612426 332 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 AL357080.1-201ENST00000617394 239 ntBASIC2.97□□□□□ -1.93
HMGCS2P54868 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HMGCS2P54868 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.97□□□□□ -1.93
HMGCS2P54868 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HMGCS2P54868 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
HMGCS2P54868 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.96□□□□□ -1.94
HMGCS2P54868 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HMGCS2P54868 RNU6-500P-201ENST00000362349 107 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RNA5SP88-201ENST00000365560 109 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 SNORD51-201ENST00000384320 80 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RNU5A-2P-201ENST00000384337 116 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 Y_RNA.548-201ENST00000384656 105 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RNU6-712P-201ENST00000410558 100 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RNU2-15P-201ENST00000410692 191 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RNU4-53P-201ENST00000410828 140 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGCS2P54868 AC092447.6-201ENST00000414578 210 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AC099677.1-201ENST00000420575 175 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 MTND4P20-201ENST00000424125 869 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AC234781.2-201ENST00000426370 994 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGCS2P54868 OR6K5P-201ENST00000447050 945 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RPS27P29-201ENST00000463110 252 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 HMGB1P36-201ENST00000487709 576 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HMGCS2P54868 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGCS2P54868 MTND1P22-201ENST00000510572 951 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AC010265.1-201ENST00000513509 211 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 RNU6-232P-201ENST00000517144 64 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HMGCS2P54868 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.96□□□□□ -1.94
HMGCS2P54868 AC087373.1-201ENST00000524920 491 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AC239860.2-201ENST00000525886 270 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGCS2P54868 EEF1B2P4-201ENST00000551398 348 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HMGCS2P54868 OR4T1P-201ENST00000554933 911 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.96□□□□□ -1.94
HMGCS2P54868 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AC002076.2-201ENST00000617362 122 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AL603755.1-201ENST00000619504 163 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 AL356596.1-201ENST00000624230 379 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 PCMTD1P7-201ENST00000634506 357 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 CU459211.1-201ENST00000635667 749 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.96□□□□□ -1.94
HMGCS2P54868 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.96□□□□□ -1.94
HMGCS2P54868 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HMGCS2P54868 RNU6-553P-201ENST00000364047 96 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms