Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF39Q9H2S5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 RNU4-13P-201ENST00000364019 141 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 RNA5SP232-201ENST00000364144 119 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 Z98749.2-208ENST00000381646 500 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR519C-201ENST00000385053 87 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR1250-201ENST00000408098 113 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR1275-201ENST00000408770 80 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 RN7SL834P-201ENST00000461450 286 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 RPS26P55-201ENST00000471178 356 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 RN7SL270P-201ENST00000579643 281 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR5006-201ENST00000583027 110 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR5197-201ENST00000583721 112 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR4439-201ENST00000583746 80 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 RPS15AP11-201ENST00000594193 385 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 MIR7854-201ENST00000620068 65 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 AC120057.5-201ENST00000623840 154 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 AC232271.1-201ENST00000602455 2715 ntBASIC7.16□□□□□ -1.26
RNF39Q9H2S5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF39Q9H2S5 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 LINC01613-201ENST00000561476 2780 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 AC016588.2-201ENST00000632484 3021 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 RNU1-75P-201ENST00000347264 129 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 MIR133A2-201ENST00000347538 102 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 RNU6-888P-201ENST00000363010 101 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 AC027124.2-201ENST00000428249 105 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 COX4I1P2-201ENST00000447446 547 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 RN7SL39P-201ENST00000462264 297 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 SCARNA5-201ENST00000516201 276 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 CKS1BP7-201ENST00000522230 235 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 AC106785.4-201ENST00000569492 412 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 MIR4305-201ENST00000583252 102 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF39Q9H2S5 MIR6806-201ENST00000622141 64 ntBASIC7.15□□□□□ -1.26
RNF39Q9H2S5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 ZNF402P-201ENST00000404435 3100 ntBASIC7.15□□□□□ -1.27
RNF39Q9H2S5 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF39Q9H2S5 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 RNU1-65P-201ENST00000363919 148 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 Y_RNA.796-201ENST00000364268 102 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 Y_RNA.799-201ENST00000364992 102 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 RNA5SP485-201ENST00000365053 119 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 MIR548B-201ENST00000385247 97 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 BX276092.6-201ENST00000430476 250 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 BX276092.8-201ENST00000455722 250 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms