Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BX119904.4-201ENST00000424402 301 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.77□□□□□ -1.97
XRCC1P18887 OR4K11P-201ENST00000431829 904 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL35AP22-201ENST00000436855 335 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.77□□□□□ -1.97
XRCC1P18887 RPL21P39-201ENST00000463605 483 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPS27AP9-201ENST00000477681 438 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC004924.1-201ENST00000480160 781 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL21P93-201ENST00000480465 489 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC233702.1-201ENST00000482905 502 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC087190.1-201ENST00000484462 480 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC093591.1-201ENST00000491435 481 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL21P16-201ENST00000495531 483 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC091951.3-201ENST00000504093 246 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
XRCC1P18887 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
XRCC1P18887 AC119751.5-201ENST00000514077 770 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.77□□□□□ -1.97
XRCC1P18887 CYCSP39-201ENST00000565821 309 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL23AP84-201ENST00000571193 464 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC136618.2-201ENST00000575091 400 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.77□□□□□ -1.97
XRCC1P18887 AC025588.2-201ENST00000604851 466 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC072039.2-201ENST00000608883 439 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AC092106.3-201ENST00000611308 722 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AL359198.2-201ENST00000611836 194 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 TPTE2P4-201ENST00000258589 1605 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
XRCC1P18887 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
XRCC1P18887 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
XRCC1P18887 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
XRCC1P18887 DDX10P1-201ENST00000448545 1933 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
XRCC1P18887 AL672167.1-206ENST00000356293 943 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
XRCC1P18887 RNU6-223P-201ENST00000362830 107 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 RNU5E-8P-201ENST00000363502 116 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 MTND2P9-201ENST00000422293 931 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.76□□□□□ -1.97
XRCC1P18887 RPL36AP6-201ENST00000435770 321 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.76□□□□□ -1.97
XRCC1P18887 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.76□□□□□ -1.97
XRCC1P18887 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.76□□□□□ -1.97
XRCC1P18887 OR6K1P-201ENST00000456766 971 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 HMGB1P36-201ENST00000487709 576 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AC034159.1-201ENST00000513885 583 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AC090136.1-201ENST00000520009 240 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.76□□□□□ -1.97
XRCC1P18887 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.76□□□□□ -1.97
XRCC1P18887 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.76□□□□□ -1.97
XRCC1P18887 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.76□□□□□ -1.97
XRCC1P18887 AL133271.1-201ENST00000538229 291 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.76□□□□□ -1.97
XRCC1P18887 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.76□□□□□ -1.97
XRCC1P18887 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.76□□□□□ -1.97
XRCC1P18887 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.76□□□□□ -1.97
XRCC1P18887 AGGF1P5-201ENST00000567900 919 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AC138761.3-201ENST00000579993 334 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AC068313.1-201ENST00000604028 1008 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AC004696.1-201ENST00000614345 607 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.76□□□□□ -1.97
XRCC1P18887 AC027309.3-201ENST00000623419 351 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 PCMTD1P7-201ENST00000634506 357 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
XRCC1P18887 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
XRCC1P18887 AC009902.3-201ENST00000606235 2172 ntBASIC2.76□□□□□ -1.97
XRCC1P18887 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 AC011460.1-201ENST00000636268 1834 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC012321.1-201ENST00000561622 1588 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.75□□□□□ -1.97
XRCC1P18887 SNORA14A-201ENST00000364773 135 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 SNORA36C-201ENST00000384289 132 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 RNU6-114P-201ENST00000384704 105 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 MIR1305-201ENST00000408300 86 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 RNA5SP492-201ENST00000411330 114 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 RNU6-516P-201ENST00000411381 104 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.75□□□□□ -1.97
XRCC1P18887 AL008987.1-201ENST00000415528 237 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.75□□□□□ -1.97
XRCC1P18887 AC018630.2-202ENST00000422992 927 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.75□□□□□ -1.97
XRCC1P18887 RPL23AP58-201ENST00000440453 469 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 MRPL50P4-201ENST00000446432 475 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 RPL23AP20-201ENST00000447965 421 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC106872.3-201ENST00000495104 446 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC022447.3-201ENST00000506865 495 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 RNA5SP356-201ENST00000515972 94 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 RN7SKP132-201ENST00000516001 208 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 SCARNA15.2-201ENST00000516409 127 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.75□□□□□ -1.97
XRCC1P18887 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.75□□□□□ -1.97
XRCC1P18887 AP001372.4-201ENST00000524889 472 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC068587.4-201ENST00000533893 186 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms