Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC022447.4-201ENST00000504053 364 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD8P13378 HIGD1AP3-201ENST00000515857 278 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 SNORA40.14-201ENST00000516543 86 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 RNU6-840P-201ENST00000517275 65 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD8P13378 AP006587.4-201ENST00000526053 529 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD8P13378 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD8P13378 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 MIR4273-201ENST00000582824 84 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AL590392.1-201ENST00000604960 446 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 RNU6-85P-201ENST00000605989 107 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC012603.1-201ENST00000606424 528 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 AC096772.1-201ENST00000609146 564 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 U3.53-201ENST00000628922 216 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXD8P13378 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 AL138820.1-201ENST00000617901 5305 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 AC008669.1-201ENST00000565823 2178 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 PABPC1P7-201ENST00000413177 1513 ntBASIC5.22□□□□□ -1.57
HOXD8P13378 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXD8P13378 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD8P13378 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
HOXD8P13378 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.21□□□□□ -1.57
HOXD8P13378 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HOXD8P13378 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.57
HOXD8P13378 Y_RNA.14-201ENST00000362415 103 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 SNORA51.11-201ENST00000384442 131 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 Y_RNA.526-201ENST00000384572 110 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 Y_RNA.577-201ENST00000384794 101 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 MT-TW-201ENST00000387382 68 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 MIR1250-201ENST00000408098 113 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 AC108032.1-201ENST00000416706 207 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 SYF2P2-201ENST00000417620 583 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD8P13378 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD8P13378 AL132765.1-201ENST00000434165 553 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD8P13378 SCARNA10-201ENST00000459255 330 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 RNU7-169P-201ENST00000459456 61 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 RPL31P60-201ENST00000478450 367 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD8P13378 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD8P13378 RNU6-1023P-201ENST00000516137 106 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 RNU7-4P-201ENST00000516961 62 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD8P13378 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD8P13378 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXD8P13378 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXD8P13378 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXD8P13378 MIR5692A1-201ENST00000580523 69 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD8P13378 AL020997.2-201ENST00000602607 184 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 U2.22-201ENST00000636441 106 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HOXD8P13378 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD8P13378 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD8P13378 AL450345.1-202ENST00000605741 3881 ntBASIC5.21□□□□□ -1.58
HOXD8P13378 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXD8P13378 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD8P13378 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXD8P13378 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXD8P13378 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
HOXD8P13378 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD8P13378 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD8P13378 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HOXD8P13378 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD8P13378 RNU6-989P-201ENST00000362756 107 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 RNY3P11-201ENST00000364153 102 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 RNU4-42P-201ENST00000364738 142 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 Y_RNA.376-201ENST00000365638 108 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 RNU6-1329P-201ENST00000365664 107 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 SDHCP2-201ENST00000398565 501 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AC110754.1-201ENST00000399740 601 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXD8P13378 AL590704.1-201ENST00000402856 794 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AP000580.1-201ENST00000404439 358 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 MTATP6P29-201ENST00000415057 132 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 RPL17P36-201ENST00000420302 549 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 RPS15AP6-201ENST00000420703 385 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AP000942.1-201ENST00000463969 747 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AC012158.1-204ENST00000483430 465 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.2□□□□□ -1.58
HOXD8P13378 RNU6-397P-201ENST00000516226 104 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXD8P13378 IGKV2D-23-201ENST00000518179 286 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXD8P13378 BNIP3P5-201ENST00000562290 498 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXD8P13378 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXD8P13378 AL355810.1-201ENST00000614629 552 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AP001005.3-201ENST00000622049 129 ntBASIC5.2□□□□□ -1.58
HOXD8P13378 AC138965.3-201ENST00000623875 498 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms