Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.9□□□□□ -2.11
COL11A1P12107 AP004371.1-201ENST00000525240 214 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AC133794.1-201ENST00000602731 914 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AL109653.1-201ENST00000603091 248 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 HSPE1P14-201ENST00000605812 302 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AP005229.2-201ENST00000609980 697 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 MIR8084-201ENST00000614105 89 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.9□□□□□ -2.11
COL11A1P12107 AC090897.3-201ENST00000636973 1157 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
COL11A1P12107 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL11A1P12107 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL11A1P12107 AL355143.1-201ENST00000407101 841 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RNU6-77P-201ENST00000410554 91 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RNA5SP492-201ENST00000411330 114 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 SSXP9-201ENST00000417503 292 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RPS15AP40-201ENST00000419621 391 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 MTATP6P4-201ENST00000427725 675 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL11A1P12107 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC108729.2-201ENST00000476543 840 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AC079203.1-201ENST00000487972 404 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RNU6-334P-201ENST00000517072 102 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.89□□□□□ -2.11
COL11A1P12107 AP001542.2-201ENST00000593141 364 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AC012360.2-201ENST00000609349 391 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 MIR6076-201ENST00000617521 113 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AC073055.1-201ENST00000456901 1621 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RNU6-1249P-201ENST00000363237 111 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 SNORD56.5-201ENST00000364281 72 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL035405.1-201ENST00000400795 710 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 UBE2V1P11-201ENST00000411559 285 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC004965.1-201ENST00000413033 213 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL606495.1-201ENST00000422100 813 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 HSFY7P-201ENST00000432672 318 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.89□□□□□ -2.11
COL11A1P12107 HSFY8P-201ENST00000437934 318 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.89□□□□□ -2.11
COL11A1P12107 RPL7P55-201ENST00000450522 746 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 HSFY5P-201ENST00000453726 309 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.89□□□□□ -2.11
COL11A1P12107 MTND3P3-201ENST00000505004 126 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RNU6-1073P-201ENST00000517182 106 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RNU6-711P-201ENST00000517255 106 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AP003355.1-201ENST00000518956 587 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.89□□□□□ -2.11
COL11A1P12107 AC103987.3-201ENST00000582071 292 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.89□□□□□ -2.11
COL11A1P12107 YWHAQP7-201ENST00000603536 658 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL645939.4-201ENST00000604495 135 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AL355810.1-201ENST00000614629 552 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 RMST_10.1-201ENST00000616309 154 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 AC106858.1-201ENST00000637497 429 ntBASIC1.89□□□□□ -2.11
COL11A1P12107 Z82195.2-201ENST00000612348 18351 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.88□□□□□ -2.11
COL11A1P12107 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL11A1P12107 RPL21P75-201ENST00000396599 483 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 RPL21P1-201ENST00000399532 476 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 RPL21P28-201ENST00000401418 483 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 AL592114.1-201ENST00000403842 483 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 LINC01347-201ENST00000417964 355 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.88□□□□□ -2.11
COL11A1P12107 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.88□□□□□ -2.11
COL11A1P12107 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.88□□□□□ -2.11
COL11A1P12107 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.88□□□□□ -2.11
COL11A1P12107 RPL21P16-201ENST00000495531 483 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.88□□□□□ -2.11
COL11A1P12107 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.88□□□□□ -2.11
COL11A1P12107 RNA5SP480-201ENST00000516840 109 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 SCARNA1-201ENST00000517138 166 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.88□□□□□ -2.11
COL11A1P12107 SETP2-201ENST00000553886 926 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.88□□□□□ -2.11
COL11A1P12107 AC023825.1-201ENST00000566704 1030 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.88□□□□□ -2.11
COL11A1P12107 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.88□□□□□ -2.11
COL11A1P12107 AC006213.4-201ENST00000616184 634 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 AC009269.6-201ENST00000621778 588 ntBASIC1.88□□□□□ -2.11
COL11A1P12107 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.88□□□□□ -2.11
COL11A1P12107 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms