Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC140479.6-201ENST00000633535 357 ntBASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 AC008725.1-201ENST00000605123 2263 ntBASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM4Q9Y4Z0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.28□□□□□ -1.89
LSM4Q9Y4Z0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 ZNF807-201ENST00000328088 1707 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 LARP1BP1-201ENST00000506036 1359 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL158163.1-201ENST00000603915 1649 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 FAM35DP-201ENST00000323387 2712 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 RNA5SP502-201ENST00000362694 119 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 Y_RNA.372-201ENST00000365599 102 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 Y_RNA.409-201ENST00000383990 98 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 SNORA24.1-201ENST00000384401 135 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 Y_RNA.554-201ENST00000384672 102 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 MIR3074-201ENST00000384885 81 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 MIR23A-201ENST00000385245 73 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL139397.2-201ENST00000404529 772 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 HMGB3P20-201ENST00000417997 600 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 EIF1P1-201ENST00000421436 341 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 HMGB1P27-201ENST00000431429 603 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL162151.2-201ENST00000448875 158 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC027673.1-201ENST00000456245 405 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL356010.1-201ENST00000456364 102 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 MRPS17P3-201ENST00000465453 385 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 RPS29P19-201ENST00000479709 171 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 OR5BN1P-201ENST00000532955 829 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL512310.1-201ENST00000548639 172 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 MIR4775-201ENST00000581168 75 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC020914.4-201ENST00000597690 277 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC010591.1-201ENST00000603941 649 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC126118.1-201ENST00000607744 628 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 MIR486-1-201ENST00000612171 68 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL445363.3-201ENST00000623080 671 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AL157786.1-207ENST00000627771 695 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 MTND1P37-201ENST00000636562 264 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM4Q9Y4Z0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 MIR372-201ENST00000362225 67 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RNU6-179P-201ENST00000363350 107 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 SOD2P1-201ENST00000396543 562 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AL590002.1-201ENST00000406554 418 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RNU2-9P-201ENST00000410194 145 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RN7SKP53-201ENST00000411337 315 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 USP9YP18-201ENST00000425912 695 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 MTCO3P30-201ENST00000426425 670 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC087650.1-201ENST00000431445 468 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RPL23AP52-201ENST00000439311 478 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RPS4XP4-201ENST00000443195 763 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 PRDX3P3-201ENST00000447765 522 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 CEACAMP4-201ENST00000457676 421 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AL132838.2-201ENST00000492041 314 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 RN7SL691P-201ENST00000494487 301 ntBASIC3.26□□□□□ -1.89
LSM4Q9Y4Z0 AP002812.1-201ENST00000495378 474 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms