Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR548I3-201ENST00000408378 149 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 MIR548I1-201ENST00000408810 149 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 Y_RNA.623-201ENST00000411128 95 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC092423.1-201ENST00000430165 186 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC087650.1-201ENST00000431445 468 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 RPSAP50-201ENST00000481955 852 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 SCARNA16.4-201ENST00000516956 187 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC109329.1-201ENST00000518744 317 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC090517.1-201ENST00000569307 266 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC009643.2-201ENST00000603543 1448 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC032011.1-201ENST00000611703 1549 ntBASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
FOXD3Q9UJU5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 NCAPGP1-201ENST00000505112 1814 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC007685.1-201ENST00000329806 452 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RN7SKP145-201ENST00000363291 303 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 Y_RNA.483-201ENST00000384380 101 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 MIR765-201ENST00000390226 114 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RNA5SP339-201ENST00000390987 122 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 U3.42-201ENST00000408746 214 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RNA5SP487-201ENST00000410186 122 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RN7SKP125-201ENST00000410481 302 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AL117339.3-201ENST00000418733 162 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC139712.2-201ENST00000424302 339 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RPL39P38-201ENST00000467018 153 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RN7SL97P-201ENST00000486780 299 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 RPL30P10-201ENST00000488148 337 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 SNRPCP2-201ENST00000504370 475 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC091144.1-201ENST00000519573 138 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC034114.1-201ENST00000520293 285 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 uc_338.7-201ENST00000621834 124 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC138627.2-201ENST00000624202 601 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 AC243829.7-201ENST00000633081 225 ntBASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
FOXD3Q9UJU5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 AC004817.4-201ENST00000602396 3625 ntBASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 AP001029.2-203ENST00000589795 4910 ntBASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
FOXD3Q9UJU5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.19-201ENST00000362462 99 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RNA5SP305-201ENST00000362665 119 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RNU6-827P-201ENST00000365553 106 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RNU6-611P-201ENST00000384276 104 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.478-201ENST00000384358 107 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.515-201ENST00000384535 112 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AL645733.1-201ENST00000402250 217 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 DUTP5-201ENST00000406790 469 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AL772161.1-201ENST00000439130 476 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RN7SL222P-201ENST00000476452 299 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RPL7AP6-201ENST00000477943 801 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 RN7SKP276-201ENST00000516242 268 ntBASIC4.83□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.680-201ENST00000516441 93 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms