Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC092326.2-201ENST00000624772 1561 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 ELF2P3-201ENST00000445099 1506 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 RNU6-511P-201ENST00000363496 107 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 SNORA51.2-201ENST00000364595 132 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 RNA5SP189-201ENST00000364920 115 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 RNU6-76P-201ENST00000384060 104 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 Y_RNA.481-201ENST00000384373 102 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 PTMAP5-201ENST00000393073 333 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 TXNP7-201ENST00000406296 293 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AL590002.1-201ENST00000406554 418 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 MTHFD2P2-201ENST00000407725 247 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 MIR548F1-201ENST00000408667 84 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 USP12PX-201ENST00000432383 1057 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC024082.2-201ENST00000434771 238 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 RPL23AP20-201ENST00000447965 421 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 CYCSP35-201ENST00000451978 304 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 U3.44-201ENST00000458938 192 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC009646.1-201ENST00000510455 318 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC011352.1-201ENST00000512300 793 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 RNU6-1178P-201ENST00000516674 107 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 RN7SKP209-201ENST00000516888 304 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC090572.1-201ENST00000519251 160 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC098848.2-201ENST00000588023 330 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AL136363.1-201ENST00000605349 337 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC096577.2-201ENST00000611455 153 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
COL20A1Q9P218 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.07□□□□□ -1.76
COL20A1Q9P218 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL20A1Q9P218 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL20A1Q9P218 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL20A1Q9P218 RNU4-35P-201ENST00000362588 141 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 RNU6-1085P-201ENST00000363576 107 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 Y_RNA.372-201ENST00000365599 102 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 MIR607-201ENST00000385241 96 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 SNORD17-201ENST00000390930 237 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AL136372.1-201ENST00000403060 228 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 CIR1P3-201ENST00000405137 479 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 SNORA11.1-201ENST00000408133 129 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 MTATP6P18-201ENST00000417994 673 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 MTCO2P19-201ENST00000427513 598 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 BTF3L4P4-201ENST00000506381 449 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC010342.1-201ENST00000514047 877 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 RNU6-840P-201ENST00000517275 65 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 AL512310.1-201ENST00000548639 172 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC093012.1-202ENST00000549403 582 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AL359212.1-201ENST00000556608 614 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 MIR4293-201ENST00000584305 78 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 GLUD1P4-201ENST00000590914 418 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC007363.1-201ENST00000604736 620 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC068944.2-201ENST00000610373 403 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 C2orf27A-204ENST00000623058 969 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC005609.4-201ENST00000625071 447 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 AC009812.4-201ENST00000569134 1805 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
COL20A1Q9P218 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL20A1Q9P218 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL20A1Q9P218 PNPT1P2-201ENST00000456768 2050 ntBASIC4.06□□□□□ -1.76
COL20A1Q9P218 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC116096.1-201ENST00000566804 2314 ntBASIC4.05□□□□□ -1.76
COL20A1Q9P218 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
COL20A1Q9P218 AC073343.1-201ENST00000328239 651 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms