Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL359547.2-201ENST00000615810 418 ntBASIC5.91□□□□□ -1.46
TRIM47Q96LD4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 AC133552.1-201ENST00000569988 4007 ntBASIC5.91□□□□□ -1.46
TRIM47Q96LD4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.91□□□□□ -1.46
TRIM47Q96LD4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM47Q96LD4 AC107021.2-201ENST00000567714 2095 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AP000560.1-201ENST00000624150 1937 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 RNU4-7P-201ENST00000364758 141 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 Y_RNA.581-201ENST00000391017 97 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 RNU6-918P-201ENST00000391219 106 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 REREP1Y-201ENST00000422655 198 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 REREP2Y-201ENST00000439103 200 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AC021382.1-201ENST00000483523 359 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AC022133.1-201ENST00000490961 571 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AC097462.2-201ENST00000504623 481 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 RNU2-69P-201ENST00000516061 100 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AC109479.2-201ENST00000517842 174 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 FAM60DP-201ENST00000524174 632 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 CYCSP27-201ENST00000527643 293 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AL121576.1-201ENST00000556055 276 ntBASIC5.9□□□□□ -1.46
TRIM47Q96LD4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM47Q96LD4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM47Q96LD4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
TRIM47Q96LD4 AL391516.1-201ENST00000554380 2449 ntBASIC5.9□□□□□ -1.47
TRIM47Q96LD4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM47Q96LD4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM47Q96LD4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 LINC02555-201ENST00000563933 1951 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 AC004158.1-201ENST00000564508 4319 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 AL138713.1-201ENST00000624026 2130 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RNU6-596P-201ENST00000365395 98 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RNU5E-6P-201ENST00000365574 115 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RNU6-898P-201ENST00000365627 104 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 SNORA51.6-201ENST00000384151 125 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MIR23A-201ENST00000385245 73 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 SNORA69.1-201ENST00000390904 137 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 UBE2V1P4-201ENST00000425374 344 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RPL23AP4-201ENST00000427757 463 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RAC1P7-201ENST00000445367 377 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 snoU13.8-201ENST00000458890 104 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 AC018437.1-201ENST00000492214 406 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RNU6-488P-201ENST00000515918 99 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RNU6-685P-201ENST00000517088 95 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 AC134698.5-201ENST00000519444 336 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MIR1254-2-201ENST00000579553 63 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MIR7973-1-201ENST00000614683 76 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MIR6839-201ENST00000620425 113 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 Z75746.1-201ENST00000440243 2080 ntBASIC5.89□□□□□ -1.47
TRIM47Q96LD4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM47Q96LD4 RLIMP1-201ENST00000339626 1680 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AP001148.1-201ENST00000624124 2359 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 Z95331.1-201ENST00000623075 23112 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 SNORA63.4-201ENST00000362763 126 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RN7SKP227-201ENST00000364445 330 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RNA5SP479-201ENST00000364858 117 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RN7SKP153-201ENST00000365026 316 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RNU6-434P-201ENST00000384376 107 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms