Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 RNY3P11-201ENST00000364153 102 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 Y_RNA.534-201ENST00000384599 112 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 RNU6-1156P-201ENST00000410365 100 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 RNA5SP113-201ENST00000410486 84 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AL590139.1-201ENST00000416267 400 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AC108032.1-201ENST00000416706 207 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AL451062.2-201ENST00000427515 271 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AL359073.1-201ENST00000448036 403 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 FTH1P2-201ENST00000466086 412 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 RN7SL459P-201ENST00000481078 302 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 RPS15AP34-201ENST00000487776 387 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AC040926.1-201ENST00000530195 238 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 LRRC37A5P-203ENST00000580181 585 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 MIR4273-201ENST00000582824 84 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 MIR5188-201ENST00000583467 113 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AC016727.2-201ENST00000603988 621 ntBASIC5.56□□□□□ -1.52
TRIM50Q86XT4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM50Q86XT4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC005332.5-201ENST00000591222 2919 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 MTND5P7-201ENST00000413558 1798 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AL450326.2-201ENST00000421913 1962 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC005183.1-201ENST00000603687 1979 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC008669.1-201ENST00000565823 2178 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RNA5SP505-201ENST00000364748 108 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RNU6-398P-201ENST00000384143 109 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RNU6-1026P-201ENST00000384465 108 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RNU6-1179P-201ENST00000384667 107 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 Y_RNA.577-201ENST00000384794 101 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 U3.32-201ENST00000408116 212 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RNU6-174P-201ENST00000410406 106 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC006946.1-201ENST00000429106 328 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 DAP3P1-201ENST00000441522 278 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC011753.3-201ENST00000443436 406 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC069499.1-201ENST00000489433 509 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 CBX3P8-201ENST00000532412 525 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 MIR4660-201ENST00000583549 74 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RN7SL52P-201ENST00000584271 284 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC068790.4-201ENST00000602474 263 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 HMGB1P50-201ENST00000605814 607 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AL591516.1-201ENST00000611326 274 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RN7SL722P-201ENST00000617780 284 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 RN7SL565P-201ENST00000618246 284 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AL138825.1-201ENST00000618587 192 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AP000346.3-201ENST00000622821 210 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AC138627.2-201ENST00000624202 601 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 AL512643.1-201ENST00000635735 524 ntBASIC5.55□□□□□ -1.52
TRIM50Q86XT4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM50Q86XT4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 EOGT-210ENST00000615922 1931 ntBASIC5.54□□□□□ -1.52
TRIM50Q86XT4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 RNU4-42P-201ENST00000364738 142 ntBASIC5.54□□□□□ -1.52
TRIM50Q86XT4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM50Q86XT4 Y_RNA.461-201ENST00000384263 103 ntBASIC5.54□□□□□ -1.52
TRIM50Q86XT4 MIR192-201ENST00000384915 110 ntBASIC5.54□□□□□ -1.52
TRIM50Q86XT4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms