Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CD44P16070 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
CD44P16070 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CD44P16070 AL731532.1-201ENST00000623972 4236 ntBASIC6.73□□□□□ -1.33
CD44P16070 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CD44P16070 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CD44P16070 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.73□□□□□ -1.33
CD44P16070 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CD44P16070 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.73□□□□□ -1.33
CD44P16070 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.73□□□□□ -1.33
CD44P16070 RNU5F-3P-201ENST00000363767 117 ntBASIC6.73□□□□□ -1.33
CD44P16070 RNU6-1276P-201ENST00000365372 104 ntBASIC6.73□□□□□ -1.33
CD44P16070 CRP-203ENST00000368111 512 ntTSL 3 BASIC6.73□□□□□ -1.33
CD44P16070 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.73□□□□□ -1.33
CD44P16070 RPL21P67-201ENST00000402896 478 ntBASIC6.73□□□□□ -1.33
CD44P16070 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC6.73□□□□□ -1.33
CD44P16070 AC112220.1-201ENST00000434628 355 ntBASIC6.73□□□□□ -1.33
CD44P16070 RPEP4-201ENST00000437636 602 ntBASIC6.73□□□□□ -1.33
CD44P16070 AC107297.1-201ENST00000459991 176 ntBASIC6.73□□□□□ -1.33
CD44P16070 RN7SL352P-201ENST00000466002 277 ntBASIC6.73□□□□□ -1.33
CD44P16070 AC124945.1-201ENST00000485133 188 ntBASIC6.73□□□□□ -1.33
CD44P16070 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.73□□□□□ -1.33
CD44P16070 RNU6-347P-201ENST00000516658 105 ntBASIC6.73□□□□□ -1.33
CD44P16070 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.73□□□□□ -1.33
CD44P16070 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.73□□□□□ -1.33
CD44P16070 AC060780.2-201ENST00000589047 198 ntBASIC6.73□□□□□ -1.33
CD44P16070 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.73□□□□□ -1.33
CD44P16070 SMIM12P1-201ENST00000603004 274 ntBASIC6.73□□□□□ -1.33
CD44P16070 MIR6811-201ENST00000620409 58 ntBASIC6.73□□□□□ -1.33
CD44P16070 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CD44P16070 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.73□□□□□ -1.33
CD44P16070 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
CD44P16070 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CD44P16070 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CD44P16070 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CD44P16070 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.72□□□□□ -1.33
CD44P16070 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
CD44P16070 AC022336.2-201ENST00000568966 2538 ntBASIC6.72□□□□□ -1.33
CD44P16070 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 MIR367-201ENST00000362299 68 ntBASIC6.72□□□□□ -1.33
CD44P16070 Y_RNA.342-201ENST00000365352 113 ntBASIC6.72□□□□□ -1.33
CD44P16070 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 RNU6-787P-201ENST00000384032 107 ntBASIC6.72□□□□□ -1.33
CD44P16070 SNORA79-201ENST00000408376 140 ntBASIC6.72□□□□□ -1.33
CD44P16070 RNU2-32P-201ENST00000411193 191 ntBASIC6.72□□□□□ -1.33
CD44P16070 SSXP9-201ENST00000417503 292 ntBASIC6.72□□□□□ -1.33
CD44P16070 AL391219.1-201ENST00000422570 483 ntBASIC6.72□□□□□ -1.33
CD44P16070 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CD44P16070 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.72□□□□□ -1.33
CD44P16070 AC144530.1-201ENST00000452862 555 ntBASIC6.72□□□□□ -1.33
CD44P16070 AC004129.2-201ENST00000457229 287 ntBASIC6.72□□□□□ -1.33
CD44P16070 RPL21P10-201ENST00000463521 490 ntBASIC6.72□□□□□ -1.33
CD44P16070 RN7SL393P-201ENST00000463588 296 ntBASIC6.72□□□□□ -1.33
CD44P16070 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.72□□□□□ -1.33
CD44P16070 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.72□□□□□ -1.33
CD44P16070 ZNF519P4-201ENST00000514008 125 ntBASIC6.72□□□□□ -1.33
CD44P16070 GMPSP1-201ENST00000514075 579 ntBASIC6.72□□□□□ -1.33
CD44P16070 HIGD1AP3-201ENST00000515857 278 ntBASIC6.72□□□□□ -1.33
CD44P16070 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.72□□□□□ -1.33
CD44P16070 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.72□□□□□ -1.33
CD44P16070 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.72□□□□□ -1.33
CD44P16070 AC005224.3-201ENST00000584683 2140 ntBASIC6.72□□□□□ -1.33
CD44P16070 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.72□□□□□ -1.33
CD44P16070 uc_338.26-201ENST00000612659 160 ntBASIC6.72□□□□□ -1.33
CD44P16070 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.72□□□□□ -1.33
CD44P16070 AC111152.1-202ENST00000635848 339 ntBASIC6.72□□□□□ -1.33
CD44P16070 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
CD44P16070 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CD44P16070 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.72□□□□□ -1.33
CD44P16070 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CD44P16070 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CD44P16070 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CD44P16070 LINC01613-201ENST00000561476 2780 ntBASIC6.71□□□□□ -1.33
CD44P16070 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.33
CD44P16070 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CD44P16070 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
CD44P16070 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CD44P16070 RNA5SP475-201ENST00000410568 110 ntBASIC6.71□□□□□ -1.34
CD44P16070 Y_RNA.622-201ENST00000411091 108 ntBASIC6.71□□□□□ -1.34
CD44P16070 AC245096.1-201ENST00000413104 546 ntBASIC6.71□□□□□ -1.34
CD44P16070 AL096829.1-201ENST00000413677 457 ntBASIC6.71□□□□□ -1.34
CD44P16070 AC245884.2-201ENST00000426257 404 ntBASIC6.71□□□□□ -1.34
CD44P16070 LINC00328-2P-201ENST00000436585 219 ntBASIC6.71□□□□□ -1.34
CD44P16070 AC245291.3-201ENST00000443400 292 ntBASIC6.71□□□□□ -1.34
CD44P16070 SDC4P-201ENST00000453285 601 ntBASIC6.71□□□□□ -1.34
CD44P16070 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC6.71□□□□□ -1.34
CD44P16070 snoU13.29-201ENST00000459370 104 ntBASIC6.71□□□□□ -1.34
CD44P16070 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.71□□□□□ -1.34
CD44P16070 AC139453.3-201ENST00000493276 369 ntBASIC6.71□□□□□ -1.34
CD44P16070 SNORA74.1-201ENST00000516320 180 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms