Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC007991.1-201ENST00000522680 631 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC136777.2-201ENST00000522979 358 ntBASIC5.1□□□□□ -1.59
SOX1O00570 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 AC023157.2-201ENST00000540596 141 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AL049839.1-201ENST00000556151 657 ntBASIC5.1□□□□□ -1.59
SOX1O00570 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.1□□□□□ -1.59
SOX1O00570 RN7SL435P-201ENST00000584418 282 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.1□□□□□ -1.59
SOX1O00570 RPL7P50-201ENST00000600588 727 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC025857.2-201ENST00000602711 238 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC108738.1-201ENST00000603703 237 ntBASIC5.1□□□□□ -1.59
SOX1O00570 AC004805.2-201ENST00000605382 482 ntBASIC5.1□□□□□ -1.59
SOX1O00570 HMGN2P28-201ENST00000606102 262 ntBASIC5.1□□□□□ -1.59
SOX1O00570 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 AC141273.2-201ENST00000618989 130 ntBASIC5.1□□□□□ -1.59
SOX1O00570 uc_338.7-201ENST00000621834 124 ntBASIC5.1□□□□□ -1.59
SOX1O00570 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.1□□□□□ -1.59
SOX1O00570 AC083843.2-201ENST00000568248 6253 ntBASIC5.1□□□□□ -1.59
SOX1O00570 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SOX1O00570 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX1O00570 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX1O00570 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX1O00570 AC140134.1-201ENST00000511830 3544 ntBASIC5.09□□□□□ -1.59
SOX1O00570 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SOX1O00570 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX1O00570 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX1O00570 RNU6-1059P-201ENST00000363752 98 ntBASIC5.09□□□□□ -1.59
SOX1O00570 RN7SKP153-201ENST00000365026 316 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC019155.1-201ENST00000382242 574 ntBASIC5.09□□□□□ -1.59
SOX1O00570 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.09□□□□□ -1.59
SOX1O00570 RNU6ATAC-201ENST00000408749 126 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX1O00570 HMGB1P9-201ENST00000429856 646 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX1O00570 ARL5AP4-201ENST00000430731 512 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AL445584.1-201ENST00000431451 330 ntBASIC5.09□□□□□ -1.59
SOX1O00570 RPS29P7-201ENST00000439662 171 ntBASIC5.09□□□□□ -1.59
SOX1O00570 NEFMP1-201ENST00000443423 1006 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC073910.1-201ENST00000445047 438 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC008264.1-201ENST00000447612 367 ntBASIC5.09□□□□□ -1.59
SOX1O00570 RNU6-1132P-201ENST00000459214 107 ntBASIC5.09□□□□□ -1.59
SOX1O00570 RPL9P32-201ENST00000464118 620 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC010683.1-201ENST00000473673 378 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX1O00570 RNU6-352P-201ENST00000516908 107 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AP006587.4-201ENST00000526053 529 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX1O00570 RN7SL703P-201ENST00000578485 302 ntBASIC5.09□□□□□ -1.59
SOX1O00570 MIR5699-201ENST00000578903 90 ntBASIC5.09□□□□□ -1.59
SOX1O00570 MIR4286-201ENST00000580651 93 ntBASIC5.09□□□□□ -1.59
SOX1O00570 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX1O00570 SRGNP1-201ENST00000603392 451 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AL034351.1-201ENST00000605288 668 ntBASIC5.09□□□□□ -1.59
SOX1O00570 MIR6875-201ENST00000617506 72 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AL138825.1-201ENST00000618587 192 ntBASIC5.09□□□□□ -1.59
SOX1O00570 MIR6130-201ENST00000619419 109 ntBASIC5.09□□□□□ -1.59
SOX1O00570 AC015967.1-201ENST00000619893 476 ntBASIC5.09□□□□□ -1.59
SOX1O00570 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX1O00570 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX1O00570 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX1O00570 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.6
SOX1O00570 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SOX1O00570 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SOX1O00570 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
SOX1O00570 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX1O00570 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX1O00570 Y_RNA.314-201ENST00000365114 102 ntBASIC5.08□□□□□ -1.6
SOX1O00570 Y_RNA.350-201ENST00000365409 98 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RNU6-190P-201ENST00000384154 102 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RNU6-472P-201ENST00000384299 107 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RNU1-82P-201ENST00000390851 165 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RNU6-821P-201ENST00000390995 107 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RPL21P1-201ENST00000399532 476 ntBASIC5.08□□□□□ -1.6
SOX1O00570 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX1O00570 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX1O00570 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX1O00570 CYCSP43-201ENST00000438233 310 ntBASIC5.08□□□□□ -1.6
SOX1O00570 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.08□□□□□ -1.6
SOX1O00570 AC087385.1-201ENST00000475062 312 ntBASIC5.08□□□□□ -1.6
SOX1O00570 AP000926.1-201ENST00000479573 241 ntBASIC5.08□□□□□ -1.6
SOX1O00570 AC011005.2-201ENST00000487324 359 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RN7SL814P-201ENST00000487715 300 ntBASIC5.08□□□□□ -1.6
SOX1O00570 AC022133.1-201ENST00000490961 571 ntBASIC5.08□□□□□ -1.6
SOX1O00570 PARP4P3-201ENST00000510265 317 ntBASIC5.08□□□□□ -1.6
SOX1O00570 FTH1P9-201ENST00000513251 355 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RNU6-390P-201ENST00000516259 103 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RN7SKP277-201ENST00000516895 283 ntBASIC5.08□□□□□ -1.6
SOX1O00570 RNU6-677P-201ENST00000516914 101 ntBASIC5.08□□□□□ -1.6
SOX1O00570 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX1O00570 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX1O00570 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms