Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC011451.2-201ENST00000604303 598 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AP001330.4-201ENST00000604350 154 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC103710.4-201ENST00000609301 899 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 TAB3P1-202ENST00000452645 1634 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC004972.1-201ENST00000623934 2209 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC009812.4-201ENST00000569134 1805 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-553P-201ENST00000364047 96 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 SAR1AP2-201ENST00000392696 594 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RPS15AP38-201ENST00000413110 372 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 HMGB1P11-201ENST00000413899 637 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AL645937.1-202ENST00000421799 937 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL7P46-201ENST00000425129 740 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 LARP1BP3-201ENST00000437229 869 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MTCYBP39-201ENST00000437562 491 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 HMGB1P12-201ENST00000438594 598 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 THAP5P1-201ENST00000439089 262 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RABEPKP1-201ENST00000440529 1026 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AL662791.1-201ENST00000441992 928 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AL162389.1-201ENST00000449233 177 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 OR6K1P-201ENST00000456766 971 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 BZW1P2-201ENST00000473537 826 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RPS27AP1-201ENST00000475545 471 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL30P6-201ENST00000475925 342 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RN7SL633P-201ENST00000488974 297 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC106872.3-201ENST00000495104 446 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MLLT10P2-201ENST00000506434 249 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-232P-201ENST00000517144 64 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC013828.2-201ENST00000532487 235 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC068587.4-201ENST00000533893 186 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 SYF2P1-201ENST00000550658 413 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MRPS36P5-201ENST00000551909 298 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MED28P6-201ENST00000558776 231 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC090888.1-201ENST00000561335 1141 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 CYCSP39-201ENST00000565821 309 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AP001004.1-201ENST00000582468 324 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AP001029.3-201ENST00000588063 596 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 ELOCP29-201ENST00000588193 334 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AP000403.1-201ENST00000603349 851 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC006023.1-201ENST00000603944 259 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AC106028.5-201ENST00000610332 395 ntBASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NEDD8-MDP1E9PL57 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND5P33-201ENST00000571250 1450 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC006378.2-201ENST00000623178 2476 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 Y_RNA.97-201ENST00000363094 102 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 Y_RNA.169-201ENST00000363745 96 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 DEFB109C-201ENST00000382575 264 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 DEFB109B-201ENST00000382656 264 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-114P-201ENST00000384704 105 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 RNA5SP129-201ENST00000410276 118 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU2-43P-201ENST00000410306 190 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC245054.2-201ENST00000415639 319 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 SDCBPP3-201ENST00000419629 891 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 OR2AS1P-201ENST00000427827 319 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC087499.2-201ENST00000432861 149 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AL590103.1-201ENST00000434488 307 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC090774.1-201ENST00000435925 246 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC004866.2-201ENST00000438285 481 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 FAM103A2P-201ENST00000444122 354 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 NIPA2P5-201ENST00000452282 464 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL23AP31-201ENST00000456160 467 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 RN7SL283P-201ENST00000489055 303 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 MTCO2P32-201ENST00000514865 403 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 RN7SKP132-201ENST00000516001 208 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 AC103783.1-201ENST00000520506 373 ntBASIC2.97□□□□□ -1.93
NEDD8-MDP1E9PL57 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms