Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RNA5SP183-201ENST00000362452 119 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RNU5A-1-201ENST00000362698 116 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 Y_RNA.257-201ENST00000364596 102 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 MIR589-201ENST00000385238 99 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 DPPA2P3-201ENST00000411853 655 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 COX5BP7-201ENST00000414780 274 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AL592045.1-201ENST00000429867 352 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RPS15AP10-201ENST00000432472 382 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 CFL1P1-202ENST00000432948 411 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RPS11P7-201ENST00000442125 465 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AC073910.1-201ENST00000445047 438 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 PCNPP5-201ENST00000452246 481 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RN7SL814P-201ENST00000487715 300 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AF213884.1-201ENST00000488102 463 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 SUMO2P6-201ENST00000505273 288 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AC012339.2-201ENST00000523996 453 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 MIR4273-201ENST00000582824 84 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RN7SL435P-201ENST00000584418 282 ntBASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRFN4Q6PJG9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.65□□□□□ -1.66
LRFN4Q6PJG9 Y_RNA.126-201ENST00000363382 111 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 RN7SKP162-201ENST00000363605 345 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 Y_RNA.288-201ENST00000364854 92 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 RNU6-933P-201ENST00000384424 107 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 Y_RNA.512-201ENST00000384518 102 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 MIR105-1-201ENST00000385222 81 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC093655.2-201ENST00000425735 631 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AL353997.1-201ENST00000432936 108 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 RANP8-201ENST00000444720 713 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 KNOP1P3-201ENST00000446933 426 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 PTMAP3-201ENST00000447474 330 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC108860.1-201ENST00000484521 383 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC108145.1-201ENST00000503770 153 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC113155.1-201ENST00000511141 769 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 BX510359.5-201ENST00000515651 304 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 RNU6-408P-201ENST00000515910 100 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 RNU6-388P-201ENST00000517012 105 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 RNU6-389P-201ENST00000517048 105 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 IGKV2-18-201ENST00000522607 343 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC021006.3-201ENST00000530771 192 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC040958.1-201ENST00000561102 201 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC022884.2-201ENST00000578535 580 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 MIR1273C-201ENST00000578669 77 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC109309.2-201ENST00000612597 332 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 MIR6862-1-201ENST00000613016 70 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 MIR6862-2-201ENST00000614755 70 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 MTND5P27-201ENST00000428871 1720 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AP000542.2-201ENST00000623199 6179 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 SCARNA15-201ENST00000607520 4325 ntBASIC4.65□□□□□ -1.67
LRFN4Q6PJG9 AC022893.2-201ENST00000564832 3296 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 AC063976.2-201ENST00000425667 3556 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 AL049555.1-201ENST00000562834 1933 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 AP001273.1-201ENST00000624493 3152 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 RNY1P16-201ENST00000363063 111 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 RNU6-173P-201ENST00000364215 104 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 Y_RNA.276-201ENST00000364732 109 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 RNU4-42P-201ENST00000364738 142 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 RNA5SP90-201ENST00000364801 99 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 RNU6-395P-201ENST00000365662 106 ntBASIC4.64□□□□□ -1.67
LRFN4Q6PJG9 Y_RNA.396-201ENST00000383949 103 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms