Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LONRF3Q496Y0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC006504.1-201ENST00000562493 3666 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 PTMAP2-201ENST00000397627 327 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 HLFP1-201ENST00000402375 499 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC022028.1-201ENST00000412054 408 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC233728.2-201ENST00000425348 757 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 MTND2P24-201ENST00000453434 806 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 MTND1P9-201ENST00000453775 944 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 MTCO3P38-201ENST00000468910 766 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 RBM43P1-201ENST00000476891 1081 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 MTAPP1-201ENST00000489154 819 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 TRBV12-2-201ENST00000489763 344 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC092954.2-201ENST00000609103 430 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AL121772.2-201ENST00000614331 297 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AL732618.1-201ENST00000623251 301 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 AC244258.1-201ENST00000637553 1071 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 MTND5P33-201ENST00000571250 1450 ntBASIC4.36□□□□□ -1.71
LONRF3Q496Y0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LONRF3Q496Y0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC011460.1-201ENST00000636268 1834 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 DEFB108F-201ENST00000344638 222 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 RNU6-213P-201ENST00000384051 104 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 RNU6-432P-201ENST00000384196 109 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 FAT1P1-201ENST00000406588 507 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 CCNG1P1-201ENST00000406783 885 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 Y_RNA.604-201ENST00000410574 102 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 PIGFP2-201ENST00000421400 651 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 RPL7L1P10-201ENST00000427790 463 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC007389.2-201ENST00000434630 306 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 Z99127.3-201ENST00000448158 395 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AL121769.1-201ENST00000469473 401 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 RN7SL323P-201ENST00000494712 295 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AP002812.1-201ENST00000495378 474 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 RNU6-711P-201ENST00000517255 106 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 DEFB108D-201ENST00000527787 222 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC245014.2-201ENST00000603689 287 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC246785.4-201ENST00000605374 287 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 SNORA51-201ENST00000606420 132 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AP002360.4-201ENST00000606980 481 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC079684.1-201ENST00000621405 437 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AC112204.3-201ENST00000623822 332 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 CUL1P1-201ENST00000509510 2425 ntBASIC4.35□□□□□ -1.71
LONRF3Q496Y0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
LONRF3Q496Y0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 RNU4-12P-201ENST00000365233 139 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 RNU6-76P-201ENST00000384060 104 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 MIR199A2-201ENST00000385289 110 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 SNORD115-47-201ENST00000391226 86 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 MTCO3P40-201ENST00000392516 676 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms