Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC079780.1-201ENST00000428259 207 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 RPS3AP52-201ENST00000435639 297 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC104058.1-201ENST00000448028 297 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 Y_RNA.635-201ENST00000459041 101 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 VN1R17P-201ENST00000472048 1090 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AP001086.1-201ENST00000494882 321 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 TRBVA-201ENST00000498804 316 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 KLHL2P1-201ENST00000508691 521 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 RNU6-352P-201ENST00000516908 107 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN1P58418 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.95□□□□□ -1.78
CLRN1P58418 AC093249.1-201ENST00000567049 203 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC005951.2-201ENST00000576282 495 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN1P58418 AP001330.4-201ENST00000604350 154 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC010201.1-201ENST00000605051 540 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AL133215.3-201ENST00000609801 448 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 MIR6780A-201ENST00000615089 68 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC103705.1-201ENST00000619013 241 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC007546.1-201ENST00000619452 559 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 AC015967.1-201ENST00000619893 476 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN1P58418 AL359757.2-201ENST00000624309 274 ntBASIC3.95□□□□□ -1.78
CLRN1P58418 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN1P58418 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLRN1P58418 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN1P58418 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CLRN1P58418 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.94□□□□□ -1.78
CLRN1P58418 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-254P-201ENST00000363377 107 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 Y_RNA.315-201ENST00000365117 102 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-629P-201ENST00000384061 103 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-1297P-201ENST00000384415 104 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-692P-201ENST00000384496 107 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AL139039.1-201ENST00000401900 692 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 MTATP6P4-201ENST00000427725 675 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 AC107399.1-201ENST00000451226 265 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 TRBV1-201ENST00000476502 284 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AC012181.1-201ENST00000479895 423 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AC068587.1-201ENST00000483613 781 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.94□□□□□ -1.78
CLRN1P58418 RN7SL812P-201ENST00000493791 279 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 HIGD1AP13-201ENST00000509878 289 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 RNA5SP464-201ENST00000516251 108 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-256P-201ENST00000516747 97 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-566P-201ENST00000516790 107 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 RNU6-677P-201ENST00000516914 101 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 AP006289.1-201ENST00000538089 277 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 MIR3672-201ENST00000584290 82 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 AL670379.10-201ENST00000604330 253 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AL670379.9-201ENST00000605428 253 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.94□□□□□ -1.78
CLRN1P58418 AL359547.2-201ENST00000615810 418 ntBASIC3.94□□□□□ -1.78
CLRN1P58418 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLRN1P58418 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLRN1P58418 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLRN1P58418 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CLRN1P58418 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CLRN1P58418 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN1P58418 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CLRN1P58418 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLRN1P58418 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms