Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ATP5F1P5-201ENST00000526403 760 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.28□□□□□ -1.88
COL5A2P05997 OR4K7P-201ENST00000580232 945 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 AC010678.1-201ENST00000614118 713 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AC023158.2-201ENST00000614876 543 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 PCMTD1P7-201ENST00000634506 357 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL5A2P05997 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 AC092881.1-201ENST00000638218 2733 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL5A2P05997 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL5A2P05997 AC096656.1-201ENST00000623826 1364 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL5A2P05997 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
COL5A2P05997 AC010733.2-201ENST00000589496 5702 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 RPL9P7-201ENST00000330965 580 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
COL5A2P05997 RNU1-100P-201ENST00000365255 165 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 RNU6-317P-201ENST00000384031 107 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 DEFB108C-201ENST00000400154 252 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL5A2P05997 RPL23AP47-201ENST00000408017 460 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 UBE2V1P10-201ENST00000414685 269 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 MED14P1-201ENST00000430517 648 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.28□□□□□ -1.88
COL5A2P05997 RPS7P5-201ENST00000441482 581 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 RPL23AP35-201ENST00000451906 501 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 CFTRP1-201ENST00000456646 183 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 RPL30P9-201ENST00000465586 330 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 KCTD9P5-201ENST00000504141 1170 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 RN7SKP31-201ENST00000516354 278 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.28□□□□□ -1.88
COL5A2P05997 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
COL5A2P05997 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.28□□□□□ -1.88
COL5A2P05997 TRAV37-201ENST00000553906 342 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
COL5A2P05997 AC012414.6-201ENST00000568241 401 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 MTND1P15-201ENST00000579262 949 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 MTATP6P3-201ENST00000581686 676 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 MTCYBP22-201ENST00000603788 447 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AC103710.3-201ENST00000608157 948 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AC018755.4-201ENST00000619715 454 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 AL356266.1-201ENST00000623311 483 ntBASIC3.28□□□□□ -1.88
COL5A2P05997 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL5A2P05997 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL5A2P05997 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
COL5A2P05997 MTND5P6-201ENST00000422338 1798 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.27□□□□□ -1.89
COL5A2P05997 AC004925.1-201ENST00000624256 2706 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 RNU6-517P-201ENST00000384362 110 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AC007064.1-201ENST00000412238 351 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.27□□□□□ -1.89
COL5A2P05997 USP9YP20-201ENST00000419224 558 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.27□□□□□ -1.89
COL5A2P05997 HMGB3P10-201ENST00000434734 572 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.27□□□□□ -1.89
COL5A2P05997 RPS24P1-201ENST00000438550 371 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL5A2P05997 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.27□□□□□ -1.89
COL5A2P05997 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.27□□□□□ -1.89
COL5A2P05997 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL5A2P05997 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.27□□□□□ -1.89
COL5A2P05997 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.27□□□□□ -1.89
COL5A2P05997 MTND1P5-201ENST00000517906 940 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 OR5AK1P-201ENST00000524837 922 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AP000867.2-201ENST00000532468 320 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.27□□□□□ -1.89
COL5A2P05997 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.27□□□□□ -1.89
COL5A2P05997 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.27□□□□□ -1.89
COL5A2P05997 AC245505.1-201ENST00000556398 224 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.27□□□□□ -1.89
COL5A2P05997 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.27□□□□□ -1.89
COL5A2P05997 AC116447.1-201ENST00000613153 453 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.27□□□□□ -1.89
COL5A2P05997 PISRT1-201ENST00000626175 531 ntBASIC3.27□□□□□ -1.89
COL5A2P05997 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL5A2P05997 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.26□□□□□ -1.89
COL5A2P05997 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
COL5A2P05997 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
COL5A2P05997 Y_RNA.18-201ENST00000362461 102 ntBASIC3.26□□□□□ -1.89
COL5A2P05997 RNU5D-1-201ENST00000363299 116 ntBASIC3.26□□□□□ -1.89
COL5A2P05997 RNU6-1066P-201ENST00000363573 105 ntBASIC3.26□□□□□ -1.89
COL5A2P05997 MIR217-201ENST00000384817 110 ntBASIC3.26□□□□□ -1.89
COL5A2P05997 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms