Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 snoU2_19.4-201ENST00000364329 80 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 Y_RNA.329-201ENST00000365209 107 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 RNU7-107P-201ENST00000459121 61 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 RPL32P33-201ENST00000487023 394 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC016632.1-201ENST00000503994 196 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 HSPE1P4-201ENST00000550617 308 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC005519.1-201ENST00000554490 601 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AL161713.1-201ENST00000555538 145 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 uc_338.26-201ENST00000612659 160 ntBASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SPDYE4A6NLX3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 SNORA8.3-201ENST00000384679 139 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AL451050.1-201ENST00000450126 415 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AC009963.2-201ENST00000453431 138 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 SNORA58-201ENST00000505219 137 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 RNU5E-3P-201ENST00000515913 68 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 U7.2-201ENST00000607576 63 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 MIR7854-201ENST00000620068 65 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AC099654.7-201ENST00000635788 2127 ntBASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SPDYE4A6NLX3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.21□□□□□ -1.25
SPDYE4A6NLX3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RN7SKP237-201ENST00000364663 301 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RNU1-140P-201ENST00000365040 165 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 MIR626-201ENST00000385032 94 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RNU6-460P-201ENST00000391158 108 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 CYCSP17-201ENST00000407870 315 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RPS12P23-201ENST00000419579 400 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AL138785.1-201ENST00000425821 331 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 FTH1P6-201ENST00000430768 320 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 SNRPGP7-201ENST00000469016 106 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RPL30P12-201ENST00000474666 353 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RNU2-56P-201ENST00000516826 190 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 LINC00933-203ENST00000559812 219 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 CYCSP39-201ENST00000565821 309 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AC020914.7-201ENST00000594477 545 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AC006380.1-201ENST00000603598 186 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 AC110373.1-201ENST00000505994 3505 ntBASIC7.21□□□□□ -1.26
SPDYE4A6NLX3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 AL450326.2-201ENST00000421913 1962 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 RNU1-146P-201ENST00000364015 165 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 SNORA66-201ENST00000384792 133 ntBASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SPDYE4A6NLX3 RNA5SP474-201ENST00000391234 90 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms