Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.87□□□□□ -1.63
LRRC3Q9BY71 AL365440.1-201ENST00000436135 2167 ntBASIC4.87□□□□□ -1.63
LRRC3Q9BY71 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 MTND5P19-201ENST00000424872 1794 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 SNORA63C-201ENST00000364578 129 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AL590704.1-201ENST00000402856 794 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AL139397.2-201ENST00000404529 772 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 E2F6P2-201ENST00000420708 748 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 SKA2P1-201ENST00000425592 390 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AC008264.1-201ENST00000447612 367 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AC011276.1-201ENST00000469688 323 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AC083829.1-201ENST00000503756 657 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AC079140.5-201ENST00000507882 310 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 RNU6-1069P-201ENST00000516612 133 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 RNU6-1016P-201ENST00000516689 94 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 SNORA31.22-201ENST00000517204 135 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 RNU6-988P-201ENST00000519081 107 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 CYCSP27-201ENST00000527643 293 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 ATP5J2P6-201ENST00000565203 266 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 AC005951.2-201ENST00000576282 495 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 RNA5SP108-201ENST00000605921 117 ntBASIC4.86□□□□□ -1.63
LRRC3Q9BY71 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC3Q9BY71 HSPA8P4-201ENST00000511877 1920 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 Y_RNA.145-201ENST00000363527 102 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RNA5SP235-201ENST00000365411 114 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 Y_RNA.459-201ENST00000384251 102 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RNU6-45P-201ENST00000384471 107 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RNU6-308P-201ENST00000390957 107 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RPS12P24-201ENST00000412619 387 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 BX842559.1-201ENST00000419615 532 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RPL7AP25-201ENST00000423357 805 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AL669831.1-202ENST00000428504 417 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RPL7P28-201ENST00000437739 740 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AC025164.1-201ENST00000496249 478 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RANP9-201ENST00000519957 271 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AP004371.1-201ENST00000525240 214 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AP000827.1-201ENST00000527814 258 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 MIR5692A1-201ENST00000580523 69 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AC008737.2-201ENST00000599446 118 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 FAM157A-202ENST00000615155 405 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AL353748.2-201ENST00000622148 471 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AL669831.3-213ENST00000636676 183 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 AC007823.1-201ENST00000569932 1566 ntBASIC4.85□□□□□ -1.63
LRRC3Q9BY71 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC3Q9BY71 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 AC093849.1-201ENST00000563631 2209 ntBASIC4.84□□□□□ -1.63
LRRC3Q9BY71 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
LRRC3Q9BY71 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms