Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1Q5Y7H0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1Q5Y7H0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC107027.3-201ENST00000565095 3473 ntBASIC4.48□□□□□ -1.69
HLA-DQA1Q5Y7H0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1Q5Y7H0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1Q5Y7H0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-238P-201ENST00000363313 106 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 Y_RNA.153-201ENST00000363615 91 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-1059P-201ENST00000363752 98 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-1303P-201ENST00000364841 107 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 Y_RNA.455-201ENST00000384230 98 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC080125.1-201ENST00000414888 684 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL160275.3-201ENST00000423876 471 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL359672.1-201ENST00000442302 409 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RPS5P7-201ENST00000456664 608 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 SNORD5.1-201ENST00000458800 75 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC092436.3-201ENST00000511788 257 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 ENPP7P9-201ENST00000514456 627 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU1-6P-201ENST00000516290 144 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-635P-201ENST00000516651 102 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC023442.1-201ENST00000531247 422 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 OR8R1P-201ENST00000543943 764 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 CYCSP40-201ENST00000575927 294 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC022726.1-201ENST00000587475 207 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC011494.1-201ENST00000596454 237 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC002044.1-201ENST00000606707 158 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL161423.1-201ENST00000613700 262 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC087385.3-201ENST00000620477 187 ntBASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DQA1Q5Y7H0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.80-201ENST00000362996 102 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-214P-201ENST00000384130 107 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 Y_RNA.485-201ENST00000384395 102 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-45P-201ENST00000384471 107 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU6-1222P-201ENST00000384615 107 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 RNU2-43P-201ENST00000410306 190 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 USMG5P1-201ENST00000425964 177 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 H2AFZP6-201ENST00000444403 394 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL590399.6-201ENST00000446396 307 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 RPL5P30-201ENST00000465511 891 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC084198.1-201ENST00000477747 402 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 CEACAMP10-202ENST00000495431 496 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC008694.2-201ENST00000517591 306 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC107918.3-201ENST00000533272 382 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC113195.1-201ENST00000579952 141 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 MIR4443-201ENST00000585052 53 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC018889.1-201ENST00000605372 397 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL022401.1-201ENST00000619498 108 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AC073869.10-201ENST00000642016 354 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 TLK1P1-201ENST00000456760 2440 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 AL158163.1-201ENST00000603915 1649 ntBASIC4.46□□□□□ -1.7
HLA-DQA1Q5Y7H0 THAP12P5-201ENST00000405864 2275 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms