Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SOX1O00570 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX1O00570 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX1O00570 AC005005.4-201ENST00000623789 16698 ntBASIC5.14□□□□□ -1.59
SOX1O00570 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.14□□□□□ -1.59
SOX1O00570 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SOX1O00570 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX1O00570 Y_RNA.396-201ENST00000383949 103 ntBASIC5.14□□□□□ -1.59
SOX1O00570 RNU6-306P-201ENST00000384617 107 ntBASIC5.14□□□□□ -1.59
SOX1O00570 MIR449B-201ENST00000384995 97 ntBASIC5.14□□□□□ -1.59
SOX1O00570 RNU4-61P-201ENST00000411243 107 ntBASIC5.14□□□□□ -1.59
SOX1O00570 RPS23P10-201ENST00000416185 486 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX1O00570 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX1O00570 RPL7P2-201ENST00000427639 268 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC097713.2-201ENST00000430199 356 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AL117339.2-201ENST00000430475 180 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX1O00570 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX1O00570 DYNLT3P2-201ENST00000442517 295 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AL162389.1-201ENST00000449233 177 ntBASIC5.14□□□□□ -1.59
SOX1O00570 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX1O00570 AC008571.1-201ENST00000467232 300 ntBASIC5.14□□□□□ -1.59
SOX1O00570 RNU2-53P-201ENST00000516257 147 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX1O00570 AC131281.1-201ENST00000522984 164 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC091516.1-201ENST00000549191 703 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC105129.1-201ENST00000560250 297 ntBASIC5.14□□□□□ -1.59
SOX1O00570 SUB1P3-201ENST00000564581 315 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX1O00570 AC006254.3-201ENST00000603353 884 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC016727.2-201ENST00000603988 621 ntBASIC5.14□□□□□ -1.59
SOX1O00570 Z98751.3-201ENST00000604447 521 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC019206.1-201ENST00000621938 425 ntBASIC5.14□□□□□ -1.59
SOX1O00570 AC138627.2-201ENST00000624202 601 ntBASIC5.14□□□□□ -1.59
SOX1O00570 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX1O00570 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX1O00570 AC027287.1-201ENST00000553115 1453 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AC006206.1-201ENST00000544842 3387 ntBASIC5.13□□□□□ -1.59
SOX1O00570 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX1O00570 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX1O00570 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX1O00570 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX1O00570 RNA5SP366-201ENST00000365454 123 ntBASIC5.13□□□□□ -1.59
SOX1O00570 RNU6-339P-201ENST00000384310 107 ntBASIC5.13□□□□□ -1.59
SOX1O00570 MIR634-201ENST00000385208 97 ntBASIC5.13□□□□□ -1.59
SOX1O00570 MIR1252-201ENST00000408861 65 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AL354766.1-201ENST00000423396 542 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX1O00570 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX1O00570 AC007389.2-201ENST00000434630 306 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX1O00570 MTND2P29-201ENST00000438595 412 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AL353752.1-201ENST00000454946 260 ntBASIC5.13□□□□□ -1.59
SOX1O00570 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX1O00570 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.13□□□□□ -1.59
SOX1O00570 RPS23P3-201ENST00000470993 430 ntBASIC5.13□□□□□ -1.59
SOX1O00570 RPL21P103-201ENST00000479921 488 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AC146944.2-203ENST00000502493 354 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AC139495.1-202ENST00000513164 354 ntBASIC5.13□□□□□ -1.59
SOX1O00570 Y_RNA.689-201ENST00000516589 107 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AP000859.1-201ENST00000525536 307 ntBASIC5.13□□□□□ -1.59
SOX1O00570 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX1O00570 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX1O00570 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX1O00570 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX1O00570 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX1O00570 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.13□□□□□ -1.59
SOX1O00570 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SOX1O00570 MTND5P27-201ENST00000428871 1720 ntBASIC5.13□□□□□ -1.59
SOX1O00570 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX1O00570 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX1O00570 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SOX1O00570 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX1O00570 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.13□□□□□ -1.59
SOX1O00570 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SOX1O00570 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX1O00570 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX1O00570 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SOX1O00570 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX1O00570 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
SOX1O00570 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX1O00570 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX1O00570 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX1O00570 Y_RNA.210-201ENST00000364161 110 ntBASIC5.12□□□□□ -1.59
SOX1O00570 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SOX1O00570 AL139039.1-201ENST00000401900 692 ntBASIC5.12□□□□□ -1.59
SOX1O00570 RPS4XP7-201ENST00000406274 780 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms