Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AL121890.5-201ENST00000620848 304 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 AL136228.1-201ENST00000622221 319 ntBASIC5.16□□□□□ -1.58
RNF223E7ERA6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF223E7ERA6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF223E7ERA6 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 AC005224.3-201ENST00000584683 2140 ntBASIC5.15□□□□□ -1.58
RNF223E7ERA6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 AC093671.1-201ENST00000624981 2929 ntBASIC5.15□□□□□ -1.58
RNF223E7ERA6 AC018555.1-201ENST00000567548 1980 ntBASIC5.15□□□□□ -1.58
RNF223E7ERA6 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF223E7ERA6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 AC068647.1-201ENST00000489539 2265 ntBASIC5.15□□□□□ -1.58
RNF223E7ERA6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF223E7ERA6 Y_RNA.179-201ENST00000363844 90 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 RNU6-1164P-201ENST00000364428 107 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 MIR526A2-201ENST00000390198 65 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 RNU6-1228P-201ENST00000391014 107 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 MIR1178-201ENST00000408396 91 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 ELOCP21-201ENST00000412558 336 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 RPL23AP95-201ENST00000426806 265 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 AC006539.1-201ENST00000481419 501 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 AL049874.1-201ENST00000489560 388 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 ATP5LP3-201ENST00000514223 304 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 RNA5SP362-201ENST00000516048 118 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 Y_RNA.692-201ENST00000516627 105 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 AC090142.3-201ENST00000519012 385 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 MIR5571-201ENST00000577998 113 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 AL356157.2-201ENST00000605122 111 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF223E7ERA6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF223E7ERA6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF223E7ERA6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 AC107980.1-201ENST00000558671 3355 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF223E7ERA6 MROH3P-201ENST00000435735 2676 ntBASIC5.15□□□□□ -1.59
RNF223E7ERA6 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RNF223E7ERA6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF223E7ERA6 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF223E7ERA6 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF223E7ERA6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF223E7ERA6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 ZNF402P-201ENST00000404435 3100 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF223E7ERA6 SNORD32A-201ENST00000364805 84 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 RNU6-728P-201ENST00000365375 104 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 AL592291.1-201ENST00000403830 352 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 RNU6-1245P-201ENST00000411130 106 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 SDHDP6-201ENST00000414693 480 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 CYCSP52-201ENST00000422857 310 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 AL135790.2-201ENST00000437701 267 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF223E7ERA6 RPL39P29-201ENST00000447779 157 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 snoU13.3-201ENST00000459441 104 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 RPS4XP13-201ENST00000483219 789 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 AC124945.1-201ENST00000485133 188 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF223E7ERA6 RNU6-561P-201ENST00000516222 102 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 SNORA43.2-201ENST00000516652 128 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 FTH1P11-201ENST00000517577 551 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 IGLV2-28-201ENST00000520681 304 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 AC021006.3-201ENST00000530771 192 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF223E7ERA6 AC022404.1-201ENST00000555320 273 ntBASIC5.14□□□□□ -1.59
RNF223E7ERA6 MIR5688-201ENST00000580619 83 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms