Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 AC008622.2-201ENST00000617006 1229 ntBASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 AL121956.5-201ENST00000625261 221 ntBASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSNK1G3Q9Y6M4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 NEK4P2-201ENST00000580004 1012 ntBASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSNK1G3Q9Y6M4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 KRT8P45-201ENST00000414328 1447 ntBASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 UPK3BP1-201ENST00000428678 509 ntBASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 AP000550.4-202ENST00000639755 178 ntBASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSNK1G3Q9Y6M4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 AL441883.1-201ENST00000566170 1045 ntBASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CSNK1G3Q9Y6M4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CSNK1G3Q9Y6M4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms