Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GPC6Q9Y625 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.05■□□□□ 0.48
GPC6Q9Y625 AC124283.5-201ENST00000624661 1809 ntBASIC18.05■□□□□ 0.48
GPC6Q9Y625 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 ZNF815P-204ENST00000434898 1737 ntBASIC18.04■□□□□ 0.48
GPC6Q9Y625 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 RPS2P52-201ENST00000469610 820 ntBASIC18.04■□□□□ 0.48
GPC6Q9Y625 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 UNC93B4-201ENST00000505679 747 ntBASIC18.04■□□□□ 0.48
GPC6Q9Y625 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GPC6Q9Y625 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GPC6Q9Y625 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 AC093503.3-201ENST00000624917 2352 ntBASIC18.03■□□□□ 0.48
GPC6Q9Y625 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 CD99P1-205ENST00000527459 561 ntBASIC18.03■□□□□ 0.48
GPC6Q9Y625 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
GPC6Q9Y625 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GPC6Q9Y625 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GPC6Q9Y625 AC008687.6-201ENST00000596318 630 ntBASIC18.02■□□□□ 0.48
GPC6Q9Y625 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.02■□□□□ 0.48
GPC6Q9Y625 AC120498.8-201ENST00000614275 531 ntBASIC18.02■□□□□ 0.48
GPC6Q9Y625 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 AC141586.3-201ENST00000562166 1838 ntBASIC18.02■□□□□ 0.47
GPC6Q9Y625 TEX21P-204ENST00000641479 1693 ntBASIC18.02■□□□□ 0.47
GPC6Q9Y625 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
GPC6Q9Y625 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC6Q9Y625 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GPC6Q9Y625 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.01■□□□□ 0.47
GPC6Q9Y625 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms