Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 AC009078.2-202ENST00000463353 338 ntBASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.92■■■□□ 2.22
CDC42BPBQ9Y5S2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 MCCD1P1-208ENST00000445732 328 ntBASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 SLC25A6P4-201ENST00000586535 553 ntBASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 AL845331.1-201ENST00000424978 1190 ntBASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 FAAHP1-202ENST00000446499 1238 ntBASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 BMF-207ENST00000559701 630 ntTSL 3 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 AC104692.2-201ENST00000603054 253 ntBASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CDC42BPBQ9Y5S2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC28.9■■■□□ 2.22
CDC42BPBQ9Y5S2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CDC42BPBQ9Y5S2 TSPY19P-201ENST00000418461 509 ntBASIC28.89■■■□□ 2.22
CDC42BPBQ9Y5S2 TSPY18P-201ENST00000441642 509 ntBASIC28.89■■■□□ 2.22
CDC42BPBQ9Y5S2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
CDC42BPBQ9Y5S2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC28.89■■■□□ 2.21
CDC42BPBQ9Y5S2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CDC42BPBQ9Y5S2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
CDC42BPBQ9Y5S2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC28.89■■■□□ 2.21
CDC42BPBQ9Y5S2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC28.89■■■□□ 2.21
CDC42BPBQ9Y5S2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
CDC42BPBQ9Y5S2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 MIR662-201ENST00000384847 95 ntBASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 AL671883.3-201ENST00000603274 991 ntBASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CDC42BPBQ9Y5S2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CDC42BPBQ9Y5S2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 AC004263.2-201ENST00000617183 678 ntBASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 TSPY22P-201ENST00000427496 604 ntBASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC28.86■■■□□ 2.21
CDC42BPBQ9Y5S2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 KRT8P3-201ENST00000519669 1449 ntBASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPBQ9Y5S2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms