Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 KRT18P68-201ENST00000392293 1000 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AL355802.2-201ENST00000402069 882 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AC006015.1-201ENST00000429970 570 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AC104771.1-201ENST00000603335 964 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AC016405.3-201ENST00000607710 860 ntBASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGB1Q9Y5G3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 AC026185.1-201ENST00000445748 174 ntBASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 RAP2CP1-201ENST00000605103 478 ntBASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGB1Q9Y5G3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 AC139713.2-201ENST00000641328 2723 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 KRT18P11-201ENST00000435214 1283 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 AC006970.2-201ENST00000450065 779 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 RARRES2P4-201ENST00000514074 484 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 AC008764.6-201ENST00000595909 2069 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 FZD10-202ENST00000539839 3282 ntBASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGB1Q9Y5G3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGB1Q9Y5G3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms