Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 BX664615.1-201ENST00000443558 458 ntBASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 AL590326.2-201ENST00000625139 305 ntBASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00588Q9Y4M8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
LINC00588Q9Y4M8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 Z82202.1-201ENST00000623446 1880 ntBASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 DUX4L26-201ENST00000489078 1255 ntBASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AL512604.3-201ENST00000569583 964 ntBASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AL445228.2-201ENST00000605589 952 ntBASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AC006011.2-201ENST00000621313 1158 ntBASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AL138966.2-201ENST00000621997 464 ntBASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00588Q9Y4M8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00588Q9Y4M8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms