Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSX2IPQ9Y2D8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 HOMER2P1-201ENST00000455653 964 ntBASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX2IPQ9Y2D8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSX2IPQ9Y2D8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSX2IPQ9Y2D8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
SSX2IPQ9Y2D8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSX2IPQ9Y2D8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 AC009237.14-201ENST00000609975 1594 ntBASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 AC140113.3-201ENST00000605663 199 ntBASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 MYC-208ENST00000641036 567 ntBASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX2IPQ9Y2D8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 PRSS44-201ENST00000515154 1146 ntBASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX2IPQ9Y2D8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms