Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.14■■□□□ 1.3
ZC3H4Q9UPT8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
ZC3H4Q9UPT8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 SAPCD2P3-201ENST00000455031 850 ntBASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 AL136038.4-201ENST00000603606 1261 ntBASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 AC024243.1-201ENST00000609234 778 ntBASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 AC079602.3-201ENST00000623931 403 ntBASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
ZC3H4Q9UPT8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 AC092865.5-201ENST00000545435 363 ntBASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZC3H4Q9UPT8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 AKR1C7P-201ENST00000305623 895 ntBASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 Z98882.1-201ENST00000622160 2253 ntBASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZC3H4Q9UPT8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 AC138894.3-201ENST00000603787 634 ntBASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 AP001271.2-201ENST00000624018 1556 ntBASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZC3H4Q9UPT8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
ZC3H4Q9UPT8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms