Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH9Q9ULB4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CDH9Q9ULB4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 LIN28AP1-201ENST00000429574 405 ntBASIC20.2■□□□□ 0.82
CDH9Q9ULB4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.2■□□□□ 0.82
CDH9Q9ULB4 AC010203.1-204ENST00000548782 407 ntBASIC20.2■□□□□ 0.82
CDH9Q9ULB4 RN7SL850P-201ENST00000579959 291 ntBASIC20.2■□□□□ 0.82
CDH9Q9ULB4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH9Q9ULB4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 TMPOP1-202ENST00000424642 1267 ntBASIC20.19■□□□□ 0.82
CDH9Q9ULB4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 AP003041.3-201ENST00000527151 707 ntBASIC20.19■□□□□ 0.82
CDH9Q9ULB4 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH9Q9ULB4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 AC093484.2-201ENST00000580996 2166 ntBASIC20.18■□□□□ 0.82
CDH9Q9ULB4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 ATP5G1P1-201ENST00000448724 379 ntBASIC20.18■□□□□ 0.82
CDH9Q9ULB4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH9Q9ULB4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 KRT18P57-201ENST00000443599 1254 ntBASIC20.17■□□□□ 0.82
CDH9Q9ULB4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH9Q9ULB4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms