Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
DDX41Q9UJV9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 SLC25A3P1-201ENST00000443844 931 ntBASIC21.96■■□□□ 1.11
DDX41Q9UJV9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 AC011298.2-201ENST00000617989 482 ntBASIC21.96■■□□□ 1.11
DDX41Q9UJV9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
DDX41Q9UJV9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
DDX41Q9UJV9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.95■■□□□ 1.11
DDX41Q9UJV9 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.95■■□□□ 1.1
DDX41Q9UJV9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 TSPY14P-201ENST00000303979 915 ntBASIC21.95■■□□□ 1.1
DDX41Q9UJV9 TERF1P1-201ENST00000311003 1181 ntBASIC21.95■■□□□ 1.1
DDX41Q9UJV9 AC004951.3-201ENST00000418645 1148 ntBASIC21.95■■□□□ 1.1
DDX41Q9UJV9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 C2orf69P3-201ENST00000565542 1120 ntBASIC21.95■■□□□ 1.1
DDX41Q9UJV9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DDX41Q9UJV9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 AC099778.1-201ENST00000568593 1911 ntBASIC21.94■■□□□ 1.1
DDX41Q9UJV9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 AL691432.2-201ENST00000607222 2038 ntBASIC21.94■■□□□ 1.1
DDX41Q9UJV9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 AL137013.1-201ENST00000432946 1228 ntBASIC21.94■■□□□ 1.1
DDX41Q9UJV9 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 EGLN1P1-201ENST00000531623 762 ntBASIC21.94■■□□□ 1.1
DDX41Q9UJV9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 SLC25A1P4-201ENST00000567977 778 ntBASIC21.94■■□□□ 1.1
DDX41Q9UJV9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DDX41Q9UJV9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 KRT18P57-201ENST00000443599 1254 ntBASIC21.93■■□□□ 1.1
DDX41Q9UJV9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 Z85996.1-201ENST00000494644 937 ntBASIC21.93■■□□□ 1.1
DDX41Q9UJV9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX41Q9UJV9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX41Q9UJV9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.92■■□□□ 1.1
DDX41Q9UJV9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX41Q9UJV9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms