Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF2IRD1Q9UHL9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 HBZP1-201ENST00000354915 429 ntBASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 CLEC4GP1-201ENST00000596555 870 ntBASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF2IRD1Q9UHL9 GPAT2P1-201ENST00000444924 1672 ntBASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 AC073130.3-201ENST00000624389 2278 ntBASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 AL450487.1-201ENST00000426799 995 ntBASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF2IRD1Q9UHL9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
GTF2IRD1Q9UHL9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 RASA4DP-201ENST00000460726 1199 ntBASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF2IRD1Q9UHL9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
GTF2IRD1Q9UHL9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
GTF2IRD1Q9UHL9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21■□□□□ 0.95
GTF2IRD1Q9UHL9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21■□□□□ 0.95
GTF2IRD1Q9UHL9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
GTF2IRD1Q9UHL9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms