Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 SUDS3P1-201ENST00000505831 966 ntBASIC18.49■□□□□ 0.55
NDE1Q9NXR1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 AC004854.2-201ENST00000608450 1441 ntBASIC18.49■□□□□ 0.55
NDE1Q9NXR1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NDE1Q9NXR1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 AC008406.3-201ENST00000620001 1374 ntBASIC18.48■□□□□ 0.55
NDE1Q9NXR1 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 UBE2DNL-204ENST00000602536 740 ntBASIC18.48■□□□□ 0.55
NDE1Q9NXR1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NDE1Q9NXR1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 AC116351.2-201ENST00000606540 1585 ntBASIC18.47■□□□□ 0.55
NDE1Q9NXR1 AC106820.2-201ENST00000563775 3264 ntBASIC18.47■□□□□ 0.55
NDE1Q9NXR1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 AC007322.4-201ENST00000509611 723 ntBASIC18.47■□□□□ 0.55
NDE1Q9NXR1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.47■□□□□ 0.55
NDE1Q9NXR1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 KRT18P68-201ENST00000392293 1000 ntBASIC18.46■□□□□ 0.55
NDE1Q9NXR1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 ABALON-201ENST00000629058 1903 ntBASIC18.46■□□□□ 0.55
NDE1Q9NXR1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
NDE1Q9NXR1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms