Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 MESTP1-201ENST00000404287 994 ntBASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC008040.2-201ENST00000461049 708 ntBASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 NUDT16P1-203ENST00000513809 620 ntBASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC026271.3-201ENST00000571884 352 ntBASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 AC026471.5-201ENST00000615068 467 ntBASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 MIR6786-201ENST00000616843 113 ntBASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CUEDC1Q9NWM3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 TMPOP1-202ENST00000424642 1267 ntBASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 AC091390.4-202ENST00000476426 537 ntBASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CUEDC1Q9NWM3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 AC004951.3-201ENST00000418645 1148 ntBASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 AC011298.2-201ENST00000617989 482 ntBASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 AL590326.2-201ENST00000625139 305 ntBASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CUEDC1Q9NWM3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 ARMC10P1-201ENST00000313754 855 ntBASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 AL355355.2-201ENST00000442321 338 ntBASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 KRT18P35-201ENST00000510488 1269 ntBASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.46■□□□□ 0.55
CUEDC1Q9NWM3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms