Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 ABHD17AP4-201ENST00000411545 909 ntBASIC15.03■□□□□ -0
SMCO4Q9NRQ5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 AC139795.1-202ENST00000500444 432 ntBASIC15.03■□□□□ -0
SMCO4Q9NRQ5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMCO4Q9NRQ5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 KRT18P24-201ENST00000344739 1156 ntBASIC15.02■□□□□ -0
SMCO4Q9NRQ5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.02■□□□□ -0
SMCO4Q9NRQ5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SMCO4Q9NRQ5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 AC108860.2-201ENST00000562760 2183 ntBASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 AL451085.2-201ENST00000605085 799 ntBASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms