Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AP000997.3-201ENST00000623333 2250 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 AC141586.3-201ENST00000562166 1838 ntBASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SND1-IT1Q9HBX3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 BICD1-207ENST00000551848 1962 ntBASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 NOC2LP1-202ENST00000452600 2235 ntBASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MCRIP2P1-201ENST00000394346 511 ntBASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 AC016405.3-201ENST00000607710 860 ntBASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 AL354751.1-201ENST00000412768 1863 ntBASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SND1-IT1Q9HBX3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 AL031598.1-201ENST00000561511 1773 ntBASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 MFSD11-216ENST00000590393 1141 ntBASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SND1-IT1Q9HBX3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SND1-IT1Q9HBX3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms