Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 AL353807.1-201ENST00000427475 662 ntBASIC18.28■□□□□ 0.52
BRF2Q9HAW0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 MIR4651-201ENST00000582622 73 ntBASIC18.28■□□□□ 0.52
BRF2Q9HAW0 AC131212.4-201ENST00000623606 975 ntBASIC18.28■□□□□ 0.52
BRF2Q9HAW0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BRF2Q9HAW0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 C1QBPP2-201ENST00000528754 825 ntBASIC18.27■□□□□ 0.52
BRF2Q9HAW0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BRF2Q9HAW0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRF2Q9HAW0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRF2Q9HAW0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.27■□□□□ 0.51
BRF2Q9HAW0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.51
BRF2Q9HAW0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BRF2Q9HAW0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 KSR1P1-201ENST00000446298 240 ntBASIC18.26■□□□□ 0.51
BRF2Q9HAW0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 AL031598.1-201ENST00000561511 1773 ntBASIC18.26■□□□□ 0.51
BRF2Q9HAW0 Z98044.1-201ENST00000632503 1764 ntBASIC18.26■□□□□ 0.51
BRF2Q9HAW0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BRF2Q9HAW0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 HTR7P1-201ENST00000538670 1336 ntBASIC18.25■□□□□ 0.51
BRF2Q9HAW0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 AC120498.9-201ENST00000339021 3867 ntBASIC18.25■□□□□ 0.51
BRF2Q9HAW0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 AP002982.1-201ENST00000492365 877 ntBASIC18.25■□□□□ 0.51
BRF2Q9HAW0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.25■□□□□ 0.51
BRF2Q9HAW0 AC083906.6-201ENST00000641366 219 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms