Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIPK3Q9H422 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIPK3Q9H422 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.89■□□□□ 0.93
HIPK3Q9H422 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIPK3Q9H422 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 AL691432.2-201ENST00000607222 2038 ntBASIC20.88■□□□□ 0.93
HIPK3Q9H422 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
HIPK3Q9H422 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIPK3Q9H422 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 NUS1P1-201ENST00000446295 882 ntBASIC20.87■□□□□ 0.93
HIPK3Q9H422 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIPK3Q9H422 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
HIPK3Q9H422 GPAT2P1-201ENST00000444924 1672 ntBASIC20.86■□□□□ 0.93
HIPK3Q9H422 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.86■□□□□ 0.93
HIPK3Q9H422 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HIPK3Q9H422 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.86■□□□□ 0.93
HIPK3Q9H422 KRT8P26-201ENST00000534154 1276 ntBASIC20.86■□□□□ 0.93
HIPK3Q9H422 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.86■□□□□ 0.93
HIPK3Q9H422 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.86■□□□□ 0.93
HIPK3Q9H422 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HIPK3Q9H422 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.86■□□□□ 0.93
HIPK3Q9H422 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 AC036111.1-201ENST00000533973 1582 ntBASIC20.85■□□□□ 0.93
HIPK3Q9H422 AL162741.1-201ENST00000565563 1558 ntBASIC20.85■□□□□ 0.93
HIPK3Q9H422 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 IFNL4P1-201ENST00000607083 540 ntBASIC20.85■□□□□ 0.93
HIPK3Q9H422 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 AP005212.1-201ENST00000581547 1997 ntBASIC20.85■□□□□ 0.93
HIPK3Q9H422 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.85■□□□□ 0.93
HIPK3Q9H422 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HIPK3Q9H422 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms