Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMOQ99835 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
SMOQ99835 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SMOQ99835 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.06■□□□□ 0.8
SMOQ99835 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.06■□□□□ 0.8
SMOQ99835 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SMOQ99835 TSPY17P-201ENST00000450329 467 ntBASIC20.06■□□□□ 0.8
SMOQ99835 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.06■□□□□ 0.8
SMOQ99835 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.06■□□□□ 0.8
SMOQ99835 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.06■□□□□ 0.8
SMOQ99835 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.06■□□□□ 0.8
SMOQ99835 AC005332.7-201ENST00000614046 2005 ntBASIC20.06■□□□□ 0.8
SMOQ99835 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.06■□□□□ 0.8
SMOQ99835 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SMOQ99835 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.06■□□□□ 0.8
SMOQ99835 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.06■□□□□ 0.8
SMOQ99835 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMOQ99835 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMOQ99835 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.05■□□□□ 0.8
SMOQ99835 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.05■□□□□ 0.8
SMOQ99835 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.05■□□□□ 0.8
SMOQ99835 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.05■□□□□ 0.8
SMOQ99835 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.05■□□□□ 0.8
SMOQ99835 IRX1P1-201ENST00000438849 1838 ntBASIC20.05■□□□□ 0.8
SMOQ99835 AC005521.1-201ENST00000393351 872 ntBASIC20.05■□□□□ 0.8
SMOQ99835 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.05■□□□□ 0.8
SMOQ99835 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.05■□□□□ 0.8
SMOQ99835 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.05■□□□□ 0.8
SMOQ99835 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMOQ99835 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMOQ99835 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SMOQ99835 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMOQ99835 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.05■□□□□ 0.8
SMOQ99835 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.05■□□□□ 0.8
SMOQ99835 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
SMOQ99835 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMOQ99835 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMOQ99835 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMOQ99835 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMOQ99835 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 AC113347.1-201ENST00000413321 391 ntBASIC20.04■□□□□ 0.8
SMOQ99835 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.04■□□□□ 0.8
SMOQ99835 KRT18P21-201ENST00000515767 1272 ntBASIC20.04■□□□□ 0.8
SMOQ99835 AP003041.3-201ENST00000527151 707 ntBASIC20.04■□□□□ 0.8
SMOQ99835 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SMOQ99835 AC010203.1-204ENST00000548782 407 ntBASIC20.04■□□□□ 0.8
SMOQ99835 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SMOQ99835 AC010653.2-201ENST00000623505 997 ntBASIC20.04■□□□□ 0.8
SMOQ99835 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMOQ99835 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMOQ99835 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
SMOQ99835 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.04■□□□□ 0.8
SMOQ99835 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.03■□□□□ 0.8
SMOQ99835 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 FEM1AP3-201ENST00000403722 1741 ntBASIC20.03■□□□□ 0.8
SMOQ99835 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 TERF1P1-201ENST00000311003 1181 ntBASIC20.03■□□□□ 0.8
SMOQ99835 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.03■□□□□ 0.8
SMOQ99835 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 FAM210CP-201ENST00000445714 574 ntBASIC20.03■□□□□ 0.8
SMOQ99835 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.03■□□□□ 0.8
SMOQ99835 AC008622.2-201ENST00000617006 1229 ntBASIC20.03■□□□□ 0.8
SMOQ99835 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
SMOQ99835 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.03■□□□□ 0.8
SMOQ99835 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMOQ99835 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMOQ99835 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMOQ99835 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMOQ99835 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms