Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC3Q96DC8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 INGX-201ENST00000359239 846 ntBASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 CCR12P-201ENST00000446203 998 ntBASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 AL353719.1-201ENST00000566847 864 ntBASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 AC116562.4-202ENST00000641738 218 ntBASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 IRX1P1-201ENST00000438849 1838 ntBASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC3Q96DC8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 TSPY17P-201ENST00000450329 467 ntBASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 AC116562.4-201ENST00000641316 2276 ntBASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ECHDC3Q96DC8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 AC007663.1-201ENST00000438948 1240 ntBASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 AC128688.1-201ENST00000487626 519 ntBASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 FAM87A-204ENST00000613235 858 ntBASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 AC010653.2-201ENST00000623505 997 ntBASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.11■□□□□ 0.65
ECHDC3Q96DC8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 FP475955.4-201ENST00000623131 1990 ntBASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC3Q96DC8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC3Q96DC8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms