Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 AC010980.2-201ENST00000587099 1412 ntBASIC17.4■□□□□ 0.38
HPS1Q92902 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.4■□□□□ 0.38
HPS1Q92902 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HPS1Q92902 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HPS1Q92902 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.4■□□□□ 0.38
HPS1Q92902 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS1Q92902 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HPS1Q92902 AC066615.1-201ENST00000640911 628 ntBASIC17.4■□□□□ 0.38
HPS1Q92902 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HPS1Q92902 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.4■□□□□ 0.38
HPS1Q92902 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS1Q92902 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.4■□□□□ 0.38
HPS1Q92902 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 TREX1-205ENST00000625293 1783 ntBASIC17.4■□□□□ 0.38
HPS1Q92902 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS1Q92902 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS1Q92902 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS1Q92902 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HPS1Q92902 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
HPS1Q92902 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.39■□□□□ 0.38
HPS1Q92902 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
HPS1Q92902 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.39■□□□□ 0.37
HPS1Q92902 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.39■□□□□ 0.37
HPS1Q92902 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.39■□□□□ 0.37
HPS1Q92902 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS1Q92902 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
HPS1Q92902 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HPS1Q92902 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS1Q92902 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS1Q92902 AC008894.3-201ENST00000624324 3103 ntBASIC17.38■□□□□ 0.37
HPS1Q92902 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HPS1Q92902 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS1Q92902 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HPS1Q92902 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HPS1Q92902 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HPS1Q92902 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS1Q92902 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 KRT18P29-201ENST00000397031 1267 ntBASIC17.38■□□□□ 0.37
HPS1Q92902 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 MYC-209ENST00000641252 345 ntBASIC17.38■□□□□ 0.37
HPS1Q92902 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 AC011484.1-201ENST00000377652 1995 ntBASIC17.38■□□□□ 0.37
HPS1Q92902 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS1Q92902 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.38■□□□□ 0.37
HPS1Q92902 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
HPS1Q92902 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.38■□□□□ 0.37
HPS1Q92902 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HPS1Q92902 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
HPS1Q92902 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HPS1Q92902 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.37■□□□□ 0.37
HPS1Q92902 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HPS1Q92902 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms