Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 WIZP1-201ENST00000531444 2299 ntBASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 AC092368.3-202ENST00000574180 1591 ntBASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 AC005332.8-201ENST00000622750 2735 ntBASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB40AQ8WXH6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 AC026366.1-201ENST00000488803 879 ntBASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 PNMA6B-201ENST00000538162 1200 ntBASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40AQ8WXH6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 BICD1-207ENST00000551848 1962 ntBASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 AP003097.1-201ENST00000530657 1135 ntBASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 TEX21P-204ENST00000641479 1693 ntBASIC16.77■□□□□ 0.28
RAB40AQ8WXH6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms