Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 AC079598.2-202ENST00000546624 1451 ntBASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCHCR1Q8TD31 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCHCR1Q8TD31 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 LTB4R2-202ENST00000528054 3092 ntBASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 AC138932.1-201ENST00000534164 6830 ntBASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCHCR1Q8TD31 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 AL049812.1-201ENST00000432563 2267 ntBASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 AC006058.3-201ENST00000606217 1069 ntBASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCHCR1Q8TD31 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 AL121906.2-201ENST00000621597 723 ntBASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 AC104417.2-201ENST00000562989 1793 ntBASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 AC093525.10-201ENST00000625130 1569 ntBASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCHCR1Q8TD31 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 KRT8P8-201ENST00000434750 1448 ntBASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCHCR1Q8TD31 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms