Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 AC009113.1-201ENST00000570267 2443 ntBASIC18.78■□□□□ 0.6
HMGCLL1Q8TB92 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 Z99916.2-201ENST00000604037 246 ntBASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCLL1Q8TB92 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCLL1Q8TB92 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCLL1Q8TB92 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HMGCLL1Q8TB92 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HMGCLL1Q8TB92 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.77■□□□□ 0.59
HMGCLL1Q8TB92 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCLL1Q8TB92 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 AL049637.2-201ENST00000641778 930 ntBASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCLL1Q8TB92 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 AC005082.1-201ENST00000413042 2259 ntBASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 AC026471.1-201ENST00000564629 3026 ntBASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 AC141586.3-201ENST00000562166 1838 ntBASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 AC066615.1-201ENST00000640911 628 ntBASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCLL1Q8TB92 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 KRT16P1-201ENST00000399124 1418 ntBASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 ZNF815P-204ENST00000434898 1737 ntBASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 AC026271.3-201ENST00000571884 352 ntBASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCLL1Q8TB92 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms