Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTL9Q8NET4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.55■■□□□ 1.36
RTL9Q8NET4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RTL9Q8NET4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 IER3-202ENST00000376377 1350 ntBASIC23.55■■□□□ 1.36
RTL9Q8NET4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RTL9Q8NET4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.55■■□□□ 1.36
RTL9Q8NET4 GPAT2P1-201ENST00000444924 1672 ntBASIC23.55■■□□□ 1.36
RTL9Q8NET4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTL9Q8NET4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.55■■□□□ 1.36
RTL9Q8NET4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.54■■□□□ 1.36
RTL9Q8NET4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 HYMAI.1-201ENST00000620949 238 ntBASIC23.54■■□□□ 1.36
RTL9Q8NET4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 KRT8P3-201ENST00000519669 1449 ntBASIC23.54■■□□□ 1.36
RTL9Q8NET4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.54■■□□□ 1.36
RTL9Q8NET4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTL9Q8NET4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RTL9Q8NET4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RTL9Q8NET4 KRT18P48-201ENST00000434763 852 ntBASIC23.53■■□□□ 1.36
RTL9Q8NET4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.53■■□□□ 1.36
RTL9Q8NET4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.53■■□□□ 1.36
RTL9Q8NET4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.53■■□□□ 1.36
RTL9Q8NET4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.53■■□□□ 1.36
RTL9Q8NET4 GCSHP2-201ENST00000560971 527 ntBASIC23.53■■□□□ 1.36
RTL9Q8NET4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.53■■□□□ 1.36
RTL9Q8NET4 AC083849.1-201ENST00000615227 514 ntBASIC23.53■■□□□ 1.36
RTL9Q8NET4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTL9Q8NET4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTL9Q8NET4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTL9Q8NET4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTL9Q8NET4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 AC005332.1-201ENST00000577698 1310 ntBASIC23.52■■□□□ 1.36
RTL9Q8NET4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTL9Q8NET4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
RTL9Q8NET4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.35
RTL9Q8NET4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
RTL9Q8NET4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.51■■□□□ 1.35
RTL9Q8NET4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RTL9Q8NET4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.51■■□□□ 1.35
RTL9Q8NET4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTL9Q8NET4 AL023284.2-201ENST00000405850 579 ntBASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms