Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 AC116562.4-202ENST00000641738 218 ntBASIC22.25■■□□□ 1.15
PNMA1Q8ND90 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PNMA1Q8ND90 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PNMA1Q8ND90 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.25■■□□□ 1.15
PNMA1Q8ND90 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.25■■□□□ 1.15
PNMA1Q8ND90 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PNMA1Q8ND90 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 AC092338.2-201ENST00000568827 1415 ntBASIC22.24■■□□□ 1.15
PNMA1Q8ND90 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 AC128688.1-201ENST00000487626 519 ntBASIC22.24■■□□□ 1.15
PNMA1Q8ND90 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.24■■□□□ 1.15
PNMA1Q8ND90 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 AC116562.4-201ENST00000641316 2276 ntBASIC22.23■■□□□ 1.15
PNMA1Q8ND90 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 FAM87A-204ENST00000613235 858 ntBASIC22.23■■□□□ 1.15
PNMA1Q8ND90 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PNMA1Q8ND90 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 AC007663.1-201ENST00000438948 1240 ntBASIC22.22■■□□□ 1.15
PNMA1Q8ND90 SLC25A3P1-201ENST00000443844 931 ntBASIC22.22■■□□□ 1.15
PNMA1Q8ND90 TSPY17P-201ENST00000450329 467 ntBASIC22.22■■□□□ 1.15
PNMA1Q8ND90 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 AL353719.1-201ENST00000566847 864 ntBASIC22.22■■□□□ 1.15
PNMA1Q8ND90 AC005363.2-201ENST00000618631 242 ntBASIC22.22■■□□□ 1.15
PNMA1Q8ND90 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PNMA1Q8ND90 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 AC005332.7-201ENST00000614046 2005 ntBASIC22.21■■□□□ 1.15
PNMA1Q8ND90 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PNMA1Q8ND90 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PNMA1Q8ND90 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PNMA1Q8ND90 IRX1P1-201ENST00000438849 1838 ntBASIC22.2■■□□□ 1.14
PNMA1Q8ND90 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PNMA1Q8ND90 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PNMA1Q8ND90 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PNMA1Q8ND90 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms