Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 AC096733.2-201ENST00000609937 1394 ntBASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDH20Q8N6Y1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH20Q8N6Y1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDH20Q8N6Y1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDH20Q8N6Y1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDH20Q8N6Y1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.52■□□□□ 0.71
PCDH20Q8N6Y1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 CRYGFP-201ENST00000418459 633 ntBASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 KRT8P9-201ENST00000558927 1449 ntBASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDH20Q8N6Y1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 NAPSB-206ENST00000562112 1266 ntBASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 AC097493.4-201ENST00000641197 219 ntBASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDH20Q8N6Y1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 ECEL1P3-201ENST00000427961 737 ntBASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 AC012306.2-201ENST00000609350 630 ntBASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDH20Q8N6Y1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms