Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 AL353719.1-201ENST00000566847 864 ntBASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.06■□□□□ 0.48
ARHGEF39Q8N4T4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 AC007663.1-201ENST00000438948 1240 ntBASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 IRX1P1-201ENST00000438849 1838 ntBASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ARHGEF39Q8N4T4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 KRT18P22-201ENST00000402024 1347 ntBASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.04■□□□□ 0.48
ARHGEF39Q8N4T4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 AC116562.4-201ENST00000641316 2276 ntBASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ECEL1P2-202ENST00000465689 757 ntBASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 AC010653.2-201ENST00000623505 997 ntBASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 AC116562.4-202ENST00000641738 218 ntBASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 AC073508.3-201ENST00000619697 1419 ntBASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.03■□□□□ 0.48
ARHGEF39Q8N4T4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.02■□□□□ 0.48
ARHGEF39Q8N4T4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF39Q8N4T4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.02■□□□□ 0.48
ARHGEF39Q8N4T4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF39Q8N4T4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ARHGEF39Q8N4T4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF39Q8N4T4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms